Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0363
(581 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 144 6e-37
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 143 1e-36
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 131 4e-33
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 130 1e-32
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 25 0.47
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 5.8
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 144 bits (348), Expect = 6e-37
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 68 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 127
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 128 DGRTLSDYNIQKESTLHLV 146
Score = 144 bits (348), Expect = 6e-37
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 203
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 204 DGRTLSDYNIQKESTLHLV 222
Score = 144 bits (348), Expect = 6e-37
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 220 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 279
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 280 DGRTLSDYNIQKESTLHLV 298
Score = 144 bits (348), Expect = 6e-37
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 296 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 355
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 356 DGRTLSDYNIQKESTLHLV 374
Score = 144 bits (348), Expect = 6e-37
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 448 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 507
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 508 DGRTLSDYNIQKESTLHLV 526
Score = 144 bits (348), Expect = 6e-37
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 524 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 583
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 584 DGRTLSDYNIQKESTLHLV 602
Score = 144 bits (348), Expect = 6e-37
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 600 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 659
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 660 DGRTLSDYNIQKESTLHLV 678
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 25 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 204
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 205 IQKESTLHLV 234
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 141 bits (342), Expect = 3e-36
Identities = 71/79 (89%), Positives = 74/79 (93%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLE
Sbjct: 372 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLE 431
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 432 DGRTLSDYNIQKESTLHLV 450
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 25 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 204
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 205 IQKESTLHLV 234
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 131 bits (317), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +1
Query: 25 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 204
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 205 IQKE 216
IQKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 130 bits (313), Expect = 1e-32
Identities = 65/73 (89%), Positives = 68/73 (93%), Gaps = 2/73 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLE
Sbjct: 40 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLE 99
Query: 178 DGRTLSDYNIQKE 216
DGRTLSDYNIQKE
Sbjct: 100 DGRTLSDYNIQKE 112
Score = 88.6 bits (210), Expect = 3e-20
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 109 KIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 234
KIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 25.0 bits (52), Expect = 0.47
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 400 YCSPVHSRRRRWILPFSSTL*NLRTASLTFFFLCLIF 290
+C P S R + + FS+T L A +TF + L F
Sbjct: 252 FCRPTFSAARFYGIDFSNTFLGLVGAVVTFLIVLLQF 288
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 506 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 420
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 506 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 420
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 506 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 420
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 506 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 420
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 506 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 420
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 222 GGFLLDIVVREGTSIFQLLSS 160
GGFLL VV+ G ++ LSS
Sbjct: 108 GGFLLCKVVKYGQTLGPYLSS 128
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,474
Number of Sequences: 336
Number of extensions: 2422
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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