Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0363
(581 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 144 2e-36
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 26 1.0
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 25 1.4
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 24 4.1
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 9.5
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 9.5
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 9.5
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 9.5
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 144 bits (348), Expect = 2e-36
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 68 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 127
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 128 DGRTLSDYNIQKESTLHLV 146
Score = 144 bits (348), Expect = 2e-36
Identities = 72/79 (91%), Positives = 75/79 (94%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HEVRRVK--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 177
H V R++ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 203
Query: 178 DGRTLSDYNIQKESTLHLV 234
DGRTLSDYNIQKESTLHLV
Sbjct: 204 DGRTLSDYNIQKESTLHLV 222
Score = 143 bits (346), Expect = 4e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 25 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 204
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 205 IQKESTLHLV 234
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 25.8 bits (54), Expect = 1.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 15 ESEDANFRKDPHGQDHH 65
ESE N RK PH QD H
Sbjct: 50 ESEGGNLRKYPHFQDIH 66
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 25.4 bits (53), Expect = 1.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1
Query: 572 SDTVSRFYLKSIIHSSRERFLRLEGTYLFVVVFEDHRAVTLPAVVTVLHHR 420
S TV + +I + E + L GTY ++F +V L VV HHR
Sbjct: 272 SQTVFSLLVGHVITKTSEA-VPLLGTYFNCIMFMVASSVVLTVVVLNYHHR 321
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.8 bits (49), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 506 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 420
L GTY ++F +V L VV HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 22.6 bits (46), Expect = 9.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 479 VFEDHRAVTLPAVVTVLHHRHE 414
+F DHR PA V L HE
Sbjct: 903 IFIDHRGHKAPAAVVGLQFLHE 924
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 22.6 bits (46), Expect = 9.5
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 EVRRVKMQIFVKTLTGKTIT-LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 183
EVR K V+T G ++ V + + A + K P Q R IF G+ +++
Sbjct: 551 EVRNKKWSGIVETALGGCLSAFFVSTQEDWRTLDALL--KREFPDLQNRTIFTGRFVKEL 608
Query: 184 RTLSDYNIQKESTLHLV 234
+ +Q++ HL+
Sbjct: 609 YDVRSGCVQEQDGTHLL 625
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 22.6 bits (46), Expect = 9.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 569 DTVSRFYLKSIIHSSRERFLRLEGTYLFV 483
+T+ K+ + S ER+LRL+G +++
Sbjct: 364 NTIYVLKTKAGVMSKSERYLRLKGQMMYI 392
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 189 PLGLQYPEGIHPPPGV 236
P G+ P G H PPG+
Sbjct: 5 PPGVNRPPGSHRPPGL 20
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,371
Number of Sequences: 2352
Number of extensions: 12189
Number of successful extensions: 32
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -