Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0361
(601 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18; c... 104 2e-21
UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118; ... 101 1e-20
UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659; ... 92 8e-18
UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1; Pr... 89 6e-17
UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24; c... 89 1e-16
UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13; c... 89 1e-16
UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78; E... 89 1e-16
UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18; P... 87 4e-16
UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14; A... 82 1e-14
UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1; Ar... 80 5e-14
UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2; Va... 79 6e-14
UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6; Co... 78 1e-13
UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3; Fu... 76 6e-13
UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1; Ca... 75 1e-12
UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1; Phae... 73 5e-12
UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3; Al... 72 9e-12
UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5; Al... 70 4e-11
UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4; Ne... 69 1e-10
UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10; F... 67 3e-10
UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1; Pe... 67 3e-10
UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14; A... 66 6e-10
UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xe... 66 8e-10
UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3; As... 64 2e-09
UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551; ... 64 2e-09
UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7; Ch... 64 3e-09
UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14... 63 6e-09
UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;... 62 7e-09
UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl... 61 2e-08
UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6; Ar... 61 2e-08
UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=13... 60 3e-08
UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;... 60 3e-08
UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18; A... 60 4e-08
UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3; Me... 59 9e-08
UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1; Ha... 57 3e-07
UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5; Eu... 57 3e-07
UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1; Xi... 56 5e-07
UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9; Em... 55 1e-06
UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1; Ac... 55 1e-06
UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11... 54 3e-06
UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3; Bo... 54 3e-06
UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1; Lo... 52 1e-05
UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;... 51 2e-05
UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1; Scen... 50 4e-05
UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1; Va... 49 7e-05
UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3; Em... 47 3e-04
UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11... 46 5e-04
UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1; ... 46 5e-04
UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1; Rh... 46 5e-04
UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9; Euka... 45 0.001
UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6; Me... 45 0.001
UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12; M... 45 0.002
UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;... 44 0.004
UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl... 43 0.005
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 42 0.008
UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1; Di... 40 0.034
UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1; Hi... 40 0.045
UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia gloss... 40 0.059
UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132; ... 40 0.059
UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1; Tr... 39 0.078
UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1; Mi... 39 0.078
UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2; Cr... 38 0.14
UniRef50_Q7YF37 Cluster: Cytochrome c oxidase subunit 3; n=4; Ve... 38 0.24
UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1; St... 38 0.24
UniRef50_Q9FV97 Cluster: Cytochrome c oxidase subunit III; n=2; ... 36 0.55
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 36 0.97
UniRef50_A0GZ74 Cluster: Cytochrome c oxidase, subunit III; n=2;... 34 2.2
UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1; Li... 34 2.2
UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15; P... 34 2.2
UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n... 33 3.9
UniRef50_Q9MLI1 Cluster: Cytochrome c oxidase subunit 3; n=3; Di... 33 5.1
UniRef50_A2T843 Cluster: Cytochrome c oxidase subunit 3; n=18; E... 33 5.1
UniRef50_A6C0L4 Cluster: Cytochrome c oxidase, subunit III; n=1;... 33 6.8
>UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Anopheles gambiae (African malaria mosquito)
Length = 262
Score = 104 bits (249), Expect = 2e-21
Identities = 51/74 (68%), Positives = 56/74 (75%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP IE+G PP I FNPFQIPLLNT IL+ SGVTVT AHH+L+E N SQ Q LF
Sbjct: 107 LSPTIELGMTWPPVGIAAFNPFQIPLLNTAILLASGVTVTWAHHALMEGNHSQATQGLFF 166
Query: 467 TILLGFYFTILQAY 508
TI+LG YFTILQAY
Sbjct: 167 TIVLGVYFTILQAY 180
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/72 (43%), Positives = 35/72 (48%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
VDY P P TGAIG +T ++G YQ RDISREGT+QG
Sbjct: 12 VDYSPWPLTGAIGAMTTVSGLVQWFHQYTMTLFILGNVITILTMYQWWRDISREGTFQGL 71
Query: 183 HTILVNKGLR*G 218
HT V GLR G
Sbjct: 72 HTFPVTIGLRWG 83
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +1
Query: 469 YFIRILFYYFTSI*---YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+F +L YFT + YIEA FTIAD +YGSTF++A F G+HV
Sbjct: 165 FFTIVLGVYFTILQAYEYIEAPFTIADAVYGSTFYMATGFHGLHV 209
>UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118;
Bilateria|Rep: Cytochrome c oxidase subunit 3 - Locusta
migratoria (Migratory locust)
Length = 263
Score = 101 bits (242), Expect = 1e-20
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P IE+G PP I PFNP QIPLLNT IL+ SGVT+T AHHS++E N SQ Q LF
Sbjct: 108 LAPTIELGMKWPPMGIQPFNPIQIPLLNTAILLASGVTITWAHHSIMECNHSQALQGLFF 167
Query: 467 TILLGFYFTILQAY 508
T++LGFYFT+LQ Y
Sbjct: 168 TVMLGFYFTLLQMY 181
Score = 52.4 bits (120), Expect = 8e-06
Identities = 30/72 (41%), Positives = 35/72 (48%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
VDY P P TGAIG + L +G Q RD+ REGT+QG
Sbjct: 13 VDYSPWPLTGAIGAMILTSGMTKWFHTFNMNLLMIGMTVIVLTMIQWWRDVVREGTFQGL 72
Query: 183 HTILVNKGLR*G 218
HT LV+KGLR G
Sbjct: 73 HTKLVSKGLRWG 84
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +1
Query: 469 YFIRILFYYFTSI*---YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+F +L +YFT + Y EA FTIAD +YGSTFF+A F G+HV
Sbjct: 166 FFTVMLGFYFTLLQMYEYWEAPFTIADAVYGSTFFVATGFHGLHV 210
>UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Homo sapiens (Human)
Length = 261
Score = 92.3 bits (219), Expect = 8e-18
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P ++G PP+ ITP NP ++PLLNT +L+ SGV++T AHHSL+ENN +Q Q L +
Sbjct: 106 LAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLI 165
Query: 467 TILLGFYFTILQA 505
TILLG YFT+LQA
Sbjct: 166 TILLGLYFTLLQA 178
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +1
Query: 445 NKTKIIFNYFIRILF-YYFTSI*---YIEASFTIADRIYGSTFFIAQDFMGIHV 594
N+ ++I I IL YFT + Y E+ FTI+D IYGSTFF+A F G+HV
Sbjct: 155 NRNQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHV 208
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/68 (36%), Positives = 30/68 (44%)
Frame = +3
Query: 15 P*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGKHTIL 194
P P TGA+ L + +G YQ RD++RE TYQG HT
Sbjct: 15 PWPLTGALSALLMTSGLAMWFHFHSMTLLMLGLLTNTLTMYQWWRDVTRESTYQGHHTPP 74
Query: 195 VNKGLR*G 218
V KGLR G
Sbjct: 75 VQKGLRYG 82
>UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1;
Primeuchroeus sp. M48|Rep: Cytochrome c oxidase subunit
3 - Primeuchroeus sp. M48
Length = 227
Score = 89.4 bits (212), Expect = 6e-17
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP +EIG I PP ITPFNPF +PLLNTIIL+ SG+T+T HHS++ N ++ + +
Sbjct: 105 LSPAVEIGGIWPPKGITPFNPFHVPLLNTIILLSSGLTITWCHHSIMNNMKNEAINSMKM 164
Query: 467 TILLGFYFTILQAY 508
TI LG F+ILQ Y
Sbjct: 165 TITLGILFSILQGY 178
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/93 (30%), Positives = 46/93 (49%)
Frame = +1
Query: 310 KNMTPFKNYTI*SIPNSLIKYNHFN*IWGNSNMSSSLIDRK*LLTNKTKIIFNYFIRILF 489
K +TPF + + + ++ + W + ++ +++ + N K+ + ILF
Sbjct: 118 KGITPFNPFHVPLLNTIILLSSGLTITWCHHSIMNNMKNEA---INSMKMTIT--LGILF 172
Query: 490 YYFTSI*YIEASFTIADRIYGSTFFIAQDFMGI 588
YIEA FTIAD IYGSTFF+ F G+
Sbjct: 173 SILQGYEYIEAPFTIADSIYGSTFFLTTGFHGL 205
Score = 33.5 bits (73), Expect = 3.9
Identities = 22/72 (30%), Positives = 29/72 (40%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
V+ P P AI V+ ++ G Q RD+ RE T QG
Sbjct: 10 VNESPWPIXSAISVMIMLLGSIKWFSMNNPNMLMLGMITTILIMIQWWRDVIRESTLQGL 69
Query: 183 HTILVNKGLR*G 218
HT+ V+ GLR G
Sbjct: 70 HTMKVSMGLRWG 81
>UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Rhipicephalus sanguineus (Brown dog tick)
Length = 257
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSPNIEIG PP I PFNPF+IPLLN+ ILI SG+TVT +HH+++ N+ L +
Sbjct: 104 LSPNIEIGSQWPPKGIYPFNPFEIPLLNSTILISSGITVTWSHHAIMNKNYISALNSLLI 163
Query: 467 TILLGFYFTILQAY 508
TILLG FT+ Q +
Sbjct: 164 TILLGVAFTMFQGF 177
Score = 42.7 bits (96), Expect = 0.006
Identities = 25/95 (26%), Positives = 44/95 (46%)
Frame = +1
Query: 310 KNMTPFKNYTI*SIPNSLIKYNHFN*IWGNSNMSSSLIDRK*LLTNKTKIIFNYFIRILF 489
K + PF + I + ++++ + W S I K ++ ++ + + F
Sbjct: 117 KGIYPFNPFEIPLLNSTILISSGITVTW-----SHHAIMNKNYISALNSLLITILLGVAF 171
Query: 490 YYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
F Y +A F I+D I+GSTFF+ F G+HV
Sbjct: 172 TMFQGFEYFQAQFKISDGIFGSTFFMTTGFHGLHV 206
Score = 37.9 bits (84), Expect = 0.18
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
V+ P P T +I L+L G ++Q RDISREG++QG
Sbjct: 9 VEKSPWPITSSISALSLTLGFVSYFQNLSMYLILLAVLMITISSFQWWRDISREGSFQGF 68
Query: 183 HTILVNKGLR*G 218
HT V GL+ G
Sbjct: 69 HTHWVLNGLKMG 80
>UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Dugong dugon (Dugong)
Length = 261
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P E+G PP+ I P +P ++PLLNT +L+ SGVT+T AHHSL+E N Q Q LF+
Sbjct: 106 LAPTPELGGCWPPTGIHPLDPMEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMLQALFI 165
Query: 467 TILLGFYFTILQA 505
TI LG YFT+LQA
Sbjct: 166 TISLGIYFTLLQA 178
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Frame = +1
Query: 445 NKTKIIFNYFIRI-LFYYFTSI*---YIEASFTIADRIYGSTFFIAQDFMGIHV 594
N+ +++ FI I L YFT + Y EASF+I+D IYGSTFF+A F G+HV
Sbjct: 155 NRKQMLQALFITISLGIYFTLLQASEYHEASFSISDGIYGSTFFMATGFHGLHV 208
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/72 (36%), Positives = 32/72 (44%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
V+ P P TGA+ L + +G YQ RD+ REGT+QG
Sbjct: 11 VNPSPWPLTGALSALLMTSGLVMWFHYHSTILVLLGLLTNILTMYQWWRDVVREGTFQGH 70
Query: 183 HTILVNKGLR*G 218
HT V KGLR G
Sbjct: 71 HTPTVQKGLRYG 82
>UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78;
Eumetazoa|Rep: Cytochrome c oxidase subunit 3 - Gallus
gallus (Chicken)
Length = 261
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/73 (58%), Positives = 51/73 (69%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P E+G PP+ + P NP ++PLLNT IL+ SGVTVT AHHS+ E N Q L L
Sbjct: 106 LAPTPELGGQWPPTGVKPLNPLEVPLLNTAILLASGVTVTWAHHSITEGNRKQAIHALTL 165
Query: 467 TILLGFYFTILQA 505
TILLGFYFT LQA
Sbjct: 166 TILLGFYFTALQA 178
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Frame = +1
Query: 481 ILFYYFTSI*---YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+L +YFT++ Y EASF+IAD +YGSTFF+A F G+HV
Sbjct: 168 LLGFYFTALQAMEYHEASFSIADSVYGSTFFVATGFHGLHV 208
Score = 35.5 bits (78), Expect = 0.97
Identities = 24/72 (33%), Positives = 27/72 (37%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
VD P P GA L +G Q RD+ RE T+QG
Sbjct: 11 VDPSPWPIFGAAAALLTTSGLIMWFHYSSTTLLTMGLLSMLLVMLQWWRDVVRESTFQGH 70
Query: 183 HTILVNKGLR*G 218
HT V KGLR G
Sbjct: 71 HTPTVQKGLRYG 82
>UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18;
Protostomia|Rep: Cytochrome c oxidase subunit 3 - Apis
mellifera ligustica (Common honeybee)
Length = 259
Score = 86.6 bits (205), Expect = 4e-16
Identities = 43/72 (59%), Positives = 50/72 (69%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
+SPNIEI PP I FNP +IPLLN+ IL+ SG TVT +H+ LI NN +K L L
Sbjct: 105 ISPNIEINMTWPPKNIKFFNPMEIPLLNSFILVSSGFTVTLSHYYLIINNLKLSKSYLLL 164
Query: 467 TILLGFYFTILQ 502
TILLG YFTILQ
Sbjct: 165 TILLGIYFTILQ 176
Score = 38.7 bits (86), Expect = 0.10
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 436 LLTNKTKIIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
L +K+ ++ + I F +I Y + F D IYGS FF+A F G+HV
Sbjct: 155 LKLSKSYLLLTILLGIYFTILQTIEYSNSFFCFNDSIYGSIFFMATGFHGLHV 207
>UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14;
Arthropoda|Rep: Cytochrome c oxidase subunit 3 -
Leptotrombidium pallidum
Length = 259
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/73 (53%), Positives = 50/73 (68%)
Frame = +2
Query: 290 SPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLT 469
SPN+EIG I PP ++ PF +IPLLNTIIL+ SG T+T AHH L++ + + LT
Sbjct: 105 SPNVEIGSIWPPQKVVPFPVEEIPLLNTIILLSSGGTLTAAHHFLLKGEKKHSSSLMKLT 164
Query: 470 ILLGFYFTILQAY 508
ILLG FT+LQ Y
Sbjct: 165 ILLGMLFTLLQGY 177
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 481 ILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+LF Y+EA F+++D +GS FF+A F G HV
Sbjct: 169 MLFTLLQGYEYLEAKFSMSDSSFGSAFFLATGFHGAHV 206
>UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1;
Armillifer armillatus|Rep: Cytochrome c oxidase subunit
3 - Armillifer armillatus
Length = 260
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSPN +G PP I F+P +IPLLNT+IL+ SG +VT +HHSL+ N+SQ L L
Sbjct: 105 LSPNTFLGLHWPPLGIKSFSPTEIPLLNTLILLSSGASVTWSHHSLLNKNYSQFLLSLSL 164
Query: 467 TILLGFYFTILQ--AYNI 514
TI+LG YFT LQ YN+
Sbjct: 165 TIILGTYFTSLQLLEYNL 182
Score = 36.3 bits (80), Expect = 0.55
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +1
Query: 481 ILFYYFTSI*YIE---ASFTIADRIYGSTFFIAQDFMGIHV 594
IL YFTS+ +E A FT+++ I+ S FF+A F G HV
Sbjct: 167 ILGTYFTSLQLLEYNLAPFTLSESIFSSMFFLATGFHGFHV 207
>UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2;
Varroa destructor|Rep: Cytochrome c oxidase subunit 3 -
Varroa destructor (honeybee mite)
Length = 263
Score = 79.4 bits (187), Expect = 6e-14
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP+IEIG + PP I FNP++IPLLNT++L+ SG T+T +H+S++ N L L
Sbjct: 104 LSPSIEIGMMWPPKGIIFFNPYEIPLLNTMVLLMSGFTITWSHYSILNNKKLMALVSLLL 163
Query: 467 TILLGFYFTILQ 502
T+ LG YF++LQ
Sbjct: 164 TVSLGIYFSLLQ 175
Score = 33.5 bits (73), Expect = 3.9
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +1
Query: 310 KNMTPFKNYTI*SIPNSLIKYNHFN*IWGNSNMSSSLIDRK*LLTNKTKIIFNYFIRILF 489
K + F Y I + ++ + F W + S+++ K L+ ++ + I F
Sbjct: 117 KGIIFFNPYEIPLLNTMVLLMSGFTITWSHY----SILNNKKLMA-LVSLLLTVSLGIYF 171
Query: 490 YYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+ Y +A FTI D I GS F++ F G+HV
Sbjct: 172 SLLQYMEYKQALFTINDGICGSVFYMLTGFHGLHV 206
>UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6;
Coelomata|Rep: Cytochrome c oxidase subunit 3 -
Acrochordus granulatus (Rasp-skinned water snake)
Length = 261
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L P E+G PP+ ITP NP ++PLLNT +L+ SG T+T +HH++ N + L +
Sbjct: 106 LVPTPELGAEWPPTGITPLNPMEVPLLNTAVLLSSGATITWSHHTMTNGNKKEATYALMI 165
Query: 467 TILLGFYFTILQ 502
TI+LG YFT LQ
Sbjct: 166 TIMLGIYFTTLQ 177
Score = 41.9 bits (94), Expect = 0.011
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +1
Query: 445 NKTKIIFNYFIRILF-YYFTSI*---YIEASFTIADRIYGSTFFIAQDFMGIHV 594
NK + + I I+ YFT++ Y + FTI+D +YGS FF+A F G+HV
Sbjct: 155 NKKEATYALMITIMLGIYFTTLQLSEYKDTPFTISDSVYGSLFFVATGFHGLHV 208
Score = 38.3 bits (85), Expect = 0.14
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
VD P P TGA+G L L +G Q RD+ RE T+QG
Sbjct: 11 VDPSPWPLTGAMGSLLLASGLALWFHTGTLMILKLGLLTLTLTMVQWWRDVIRESTFQGH 70
Query: 183 HTILVNKGLR*G 218
HT V K +R G
Sbjct: 71 HTKGVQKNMRYG 82
>UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
- Smittium culisetae (Gut fungus)
Length = 260
Score = 76.2 bits (179), Expect = 6e-13
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN-NFSQTKQRLF 463
L P IE+G + PP I NPF IPLLNT++L+ SG TVT AH+S+I+N N +T LF
Sbjct: 104 LVPEIELGGLWPPLGIEAVNPFGIPLLNTLLLLSSGATVTWAHYSMIKNTNKKETIISLF 163
Query: 464 LTILLGFYFTILQAY 508
LTIL FT+LQ +
Sbjct: 164 LTILYATIFTLLQLF 178
Score = 32.7 bits (71), Expect = 6.8
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 442 TNKTKIIFNYFIRILFY-YFTSI*YIE---ASFTIADRIYGSTFFIAQDFMGIHV 594
TNK + I + F+ IL+ FT + E A F+ D +YG TF+ +HV
Sbjct: 153 TNKKETIISLFLTILYATIFTLLQLFEYYYAPFSFVDGVYGCTFYAGTGLHALHV 207
>UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1;
Candida stellata|Rep: Cytochrome c oxidase subunit 3 -
Candida stellata (Yeast)
Length = 271
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P++EIG I PP I P +PL NT+IL+ SG T+T +HH+LI N + LFL
Sbjct: 116 LTPSVEIGEIWPPISIIPIQATDLPLFNTLILLISGATITYSHHALIARNRFNSIFGLFL 175
Query: 467 TILLGFYFTILQAY 508
TILLGF F I Q +
Sbjct: 176 TILLGFLFIICQYF 189
Score = 39.1 bits (87), Expect = 0.078
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 445 NKTKIIFNYFIRILF-YYFTSI*YIE---ASFTIADRIYGSTFFIAQDFMGIHV 594
N+ IF F+ IL + F Y E S+T+AD +YGS FF+ GIHV
Sbjct: 165 NRFNSIFGLFLTILLGFLFIICQYFEYYYCSYTLADSVYGSVFFMLTGLHGIHV 218
>UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1;
Phaeosphaeria nodorum SN15|Rep: Cytochrome oxidase
subunit 3 - Phaeosphaeria nodorum SN15
Length = 275
Score = 72.9 bits (171), Expect = 5e-12
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP +E+G + PP I +PF++PL+NT+IL+ SG TVT HH LI N S+T L
Sbjct: 120 LSPAVELGAMWPPMGIEAIDPFELPLINTVILLSSGFTVTYGHHFLINGNRSKTLYGLLY 179
Query: 467 TILLGFYFTILQ 502
T++L FT LQ
Sbjct: 180 TVILATIFTGLQ 191
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+++ + +F + Y +SFTI+D +GS F+ F G+HV
Sbjct: 177 LLYTVILATIFTGLQGVEYSVSSFTISDGAFGSCFYFGTGFHGLHV 222
>UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3;
Aleyrodinae|Rep: Cytochrome c oxidase subunit 3 -
Bemisia tabaci (Sweetpotato whitefly)
Length = 262
Score = 72.1 bits (169), Expect = 9e-12
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP++ G I PP I + IPLLNT+IL+ SG +T AH+ L NNF +K L +
Sbjct: 107 LSPDMTTGSIWPPYLIIQMSFMDIPLLNTLILLMSGFLITWAHYDLTMNNFKNSKTSLLM 166
Query: 467 TILLGFYFTILQAY 508
+ILLG YF ++Q Y
Sbjct: 167 SILLGTYFLMIQGY 180
Score = 37.5 bits (83), Expect = 0.24
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 445 NKTKIIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+KT ++ + + F Y+ ++F+ D ++G++FFI F G+HV
Sbjct: 160 SKTSLLMSILLGTYFLMIQGYEYLNSNFSFNDSVFGNSFFILTGFHGLHV 209
>UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5;
Aleyrodidae|Rep: Cytochrome c oxidase subunit 3 -
Aleurochiton aceris
Length = 261
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP+I +G PP P + IPLLNT+IL+ SG +T AH+SL+ NN+ K +
Sbjct: 106 LSPDISLGSNWPPLGTQPVSYLNIPLLNTLILLSSGFFITWAHYSLMNNNYYMMKFNYTV 165
Query: 467 TILLGFYFTILQAYNI*KLLLPLLIEFMDPLFS 565
+IL+G YF I+Q Y + +F D FS
Sbjct: 166 SILMGVYFFIIQMYE----YFEISFDFSDSSFS 194
Score = 35.5 bits (78), Expect = 0.97
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 463 FNYFIRIL----FYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
FNY + IL F+ Y E SF +D + S+FFI F G HV
Sbjct: 161 FNYTVSILMGVYFFIIQMYEYFEISFDFSDSSFSSSFFILTGFHGFHV 208
>UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4;
Neoptera|Rep: Cytochrome c oxidase subunit 3 -
Schizaphis graminum (Aphid)
Length = 261
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P+IE+G PP I FNP IPLLNTIIL+ S T+T AH L+ N+ +T + L
Sbjct: 106 LAPSIELGLNWPPKNIMFFNPLLIPLLNTIILLTSSFTITLAHLYLLNNSKKKTIIFMNL 165
Query: 467 TILLGFYFTILQ 502
TI+L YF +LQ
Sbjct: 166 TIILSIYFLMLQ 177
Score = 41.1 bits (92), Expect = 0.019
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 436 LLTNKTK--IIFNYFIRILFYYFTSI*YIE---ASFTIADRIYGSTFFIAQDFMGIHV 594
LL N K IIF IL YF + +E A+FT +D I+GS+F++A F G+HV
Sbjct: 151 LLNNSKKKTIIFMNLTIILSIYFLMLQMLEYKQATFTFSDSIFGSSFYMATGFHGLHV 208
>UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
- Monoblepharella sp. JEL15
Length = 292
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP+I +G + PP I +P+ IPLL +IIL+ SG T T AH++LI N +F
Sbjct: 106 LSPDIVLGGVWPPIGIVSVDPWSIPLLGSIILLSSGATCTVAHNALINGNKDLAVATMFA 165
Query: 467 TILLGFYFTILQA 505
T++LGF F LQA
Sbjct: 166 TVVLGFLFVGLQA 178
>UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Pediculus humanus corporis|Rep: Cytochrome c oxidase
subunit 3 - Pediculus humanus corporis (human body
louse)
Length = 273
Score = 66.9 bits (156), Expect = 3e-10
Identities = 29/73 (39%), Positives = 48/73 (65%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP++ +G + PP ++P +PLLN+I+L+ SGV++T AH+ L+ N S + L +
Sbjct: 118 LSPDVSLGLLYPPVGVSPVGVLGVPLLNSILLLSSGVSITWAHNELLSKNISSSLIGLLI 177
Query: 467 TILLGFYFTILQA 505
T++LG F + QA
Sbjct: 178 TLILGLVFLMFQA 190
Score = 39.1 bits (87), Expect = 0.078
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++ + ++F F ++ Y +SFT+AD +GS FF+ F G HV
Sbjct: 175 LLITLILGLVFLMFQAVEYKTSSFTMADSSFGSVFFLMTGFHGAHV 220
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 147 RDISREGTYQGKHTILVNKGLR*G 218
RD++RE T+QGKHT+ V GLR G
Sbjct: 71 RDVTREATFQGKHTMEVIAGLRLG 94
>UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Schizosaccharomyces pombe (Fission yeast)
Length = 269
Score = 66.1 bits (154), Expect = 6e-10
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITP--FNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRL 460
LSP E+G + PP I +P ++PLLNT+IL+ SG ++T AH+SLI N + L
Sbjct: 112 LSPTFELGAVWPPVGIADKTIDPLEVPLLNTVILLTSGASLTYAHYSLIARNRENALKGL 171
Query: 461 FLTILLGFYFTILQAY 508
++TI L F F QAY
Sbjct: 172 YMTIALSFLFLGGQAY 187
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 511 YIEASFTIADRIYGSTFFIAQDFMGIHV 594
Y A FTI+D +YG++F+ A GIH+
Sbjct: 189 YWNAPFTISDSVYGASFYFATGLHGIHI 216
>UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xenos
vesparum|Rep: Cytochrome c oxidase subunit 3 - Xenos
vesparum
Length = 251
Score = 65.7 bits (153), Expect = 8e-10
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 499
PP + NP+ IPLLNT+IL S +T+T +HH LI N+ K F+T++LG F L
Sbjct: 112 PPKFLLMINPYHIPLLNTLILFSSSITITWSHHCLINKNYKIMKISSFITLMLGITFITL 171
Query: 500 QAY 508
Q Y
Sbjct: 172 QIY 174
>UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Yarrowia lipolytica (Candida lipolytica)
Length = 268
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
++P IE+G + PP I P ++PLLNTI+L+ SG T+T +HH+L+ N T L L
Sbjct: 113 MAPTIELGGVWPPVGIEAIGPSELPLLNTILLLCSGATLTWSHHALLGGNRFNTLLGLIL 172
Query: 467 TILLGFYFTILQ 502
TI L F I Q
Sbjct: 173 TIALAVTFMICQ 184
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+I + + F + Y A FTI+D I+GS F+ F G+H+
Sbjct: 170 LILTIALAVTFMICQYMEYSNAPFTISDGIFGSVFYFGTGFHGLHI 215
>UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 265
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P +EIG I PP I +P++IP LNT+IL+ SG VT AHH+++ + L
Sbjct: 109 LAPAVEIGGIWPPKGIEVLDPWEIPFLNTLILLSSGAAVTWAHHAILAGKEKRAVYALVA 168
Query: 467 TILLGFYFTILQ 502
T+LL FT Q
Sbjct: 169 TVLLALVFTGFQ 180
Score = 46.4 bits (105), Expect = 5e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++ + ++F F + Y +A FTI+D IYGSTFF+A F G HV
Sbjct: 166 LVATVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHV 211
>UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7;
Chromadorea|Rep: Cytochrome c oxidase subunit 3 -
Caenorhabditis elegans
Length = 255
Score = 63.7 bits (148), Expect = 3e-09
Identities = 36/72 (50%), Positives = 43/72 (59%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L P E+G P + NPF +PLLNTIIL+ SGVTVT AHHSL+ N + L
Sbjct: 102 LVPVHELGETWSPFGMHLVNPFGVPLLNTIILLSSGVTVTWAHHSLLSN--KSCTNSMIL 159
Query: 467 TILLGFYFTILQ 502
T LL YFT +Q
Sbjct: 160 TCLLAAYFTGIQ 171
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +1
Query: 436 LLTNKTKIIFNYFIRILFYYFTSI*---YIEASFTIADRIYGSTFFIAQDFMGIHV 594
LL+NK+ +L YFT I Y+EASF+IAD ++GS F+++ F GIHV
Sbjct: 147 LLSNKSCTNSMILTCLLAAYFTGIQLMEYMEASFSIADGVFGSIFYLSTGFHGIHV 202
>UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14;
Alphaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Silicibacter pomeroyi
Length = 271
Score = 62.9 bits (146), Expect = 6e-09
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +2
Query: 344 NPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTK-QRLFLTILLGFYFTILQAYNI*K 520
+PF +PL+NT++L+ SG VT AHH+L+ NN + Q L + I LG FT+LQAY +
Sbjct: 126 DPFHLPLINTLVLLLSGCAVTWAHHALVHNNDRKALIQGLSIGIFLGMIFTLLQAYEYAE 185
Query: 521 LLL 529
LLL
Sbjct: 186 LLL 188
>UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: Cytochrome c
oxidase, subunit III - Neorickettsia sennetsu (strain
Miyayama)
Length = 274
Score = 62.5 bits (145), Expect = 7e-09
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 499
PP I NP+ +PLLNT++L+ SG ++T AHHS+++ + + L T++LG FT L
Sbjct: 124 PPEGIVAVNPWNLPLLNTMVLLLSGASMTWAHHSVLKGDNDGVVKGLLYTVVLGLIFTCL 183
Query: 500 QAY 508
Q Y
Sbjct: 184 QGY 186
>UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1;
Gliricola porcelli|Rep: Cytochrome c oxidase subunit 3 -
Gliricola porcelli
Length = 234
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +2
Query: 293 PNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTI 472
P+I IG + P I+P +PLL T+IL+ SGVTVT H ++EN + + LF+TI
Sbjct: 110 PSIFIGALWPSWGISPIENMNVPLLGTLILLSSGVTVTICHKQMLENVYE--PKFLFITI 167
Query: 473 LLGFYFTILQ 502
+LG F+ILQ
Sbjct: 168 ILGVMFSILQ 177
Score = 38.7 bits (86), Expect = 0.10
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+ + ++F + YIE SF D +YGS FF+A F G HV
Sbjct: 163 LFITIILGVMFSILQMMEYIENSFCFNDSVYGSFFFLATGFHGFHV 208
>UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6;
Arthropoda|Rep: Cytochrome c oxidase subunit 3 - Ixodes
hexagonus (Hedgehog tick)
Length = 261
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 499
P + P F+IPLL T ILI SG++++ +H S+I NNF + L +TI+LG FT L
Sbjct: 117 PLKMLLPLILFEIPLLKTTILISSGISISWSHQSIINNNFKEAFNSLLITIMLGVTFTFL 176
Query: 500 QAY 508
Q +
Sbjct: 177 QGW 179
Score = 37.9 bits (84), Expect = 0.18
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++ + + F + Y ++ F+++D I+GSTFF+ F GIHV
Sbjct: 163 LLITIMLGVTFTFLQGWEYKQSQFSMSDSIFGSTFFMTTGFHGIHV 208
Score = 32.3 bits (70), Expect = 9.0
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = +3
Query: 147 RDISREGTYQGKHTILVNKGLR*GXXXXXXXXXXXXXXXXXXXXXXXYPQILKLEEYDPL 326
RDISRE + QG H+ V GL+ G +LKL +DPL
Sbjct: 59 RDISREASLQGNHSSFVIWGLKMGMILFIISEVFFFLSFFWAFFHSSLSLMLKLALHDPL 118
Query: 327 QELHHLIHSKFP 362
+ L LI + P
Sbjct: 119 KMLLPLILFEIP 130
>UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=130;
Proteobacteria|Rep: Cytochrome c oxidase, subunit III -
Pseudomonas aeruginosa
Length = 295
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 499
PPS + P+++PL+NTI+L+ S TVT AHH+L +N K L LT+LLG F IL
Sbjct: 151 PPSAV--IEPWKLPLINTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLIL 208
Query: 500 QA 505
QA
Sbjct: 209 QA 210
>UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;
Azoarcus|Rep: Cytochrome c oxidase, subunit III -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 283
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +2
Query: 335 TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
TP + IP LNT+IL+ SGVT+T AH+ L+++N SQ K L LTILLG F Q Y
Sbjct: 142 TPMGAWGIPALNTLILLSSGVTLTWAHYGLLKDNRSQLKIGLLLTILLGVTFLGFQIY 199
>UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 269
Score = 60.1 bits (139), Expect = 4e-08
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
+SP++ +G PP I P ++PLLNTIIL+ SG TVT +HH+LI N ++ L +
Sbjct: 114 MSPDVTLGACWPPVGIEAVQPTELPLLNTIILLSSGATVTYSHHALIAGNRNKALSGLLI 173
Query: 467 TILLGFYFTILQ 502
T L F Q
Sbjct: 174 TFWLIVIFVTCQ 185
Score = 33.5 bits (73), Expect = 3.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++ +++ ++F I Y A+FTI+D +YGS F+ +H+
Sbjct: 171 LLITFWLIVIFVTCQYIEYTNAAFTISDGVYGSVFYAGTGLHFLHM 216
>UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Metazoa|Rep: Cytochrome c oxidase subunit 3 - Trichoplax
adhaerens
Length = 305
Score = 58.8 bits (136), Expect = 9e-08
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI 427
L+P++E+G + PP I +PF +PLLNT IL+ SG TVT AHH++I
Sbjct: 106 LAPSVELGSVWPPLGIEALDPFAVPLLNTTILLSSGATVTWAHHAII 152
Score = 40.3 bits (90), Expect = 0.034
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++ + I+F + Y EASF I+D +YGSTFF+ G+HV
Sbjct: 207 LLMTVLLGIIFTGLQAFEYKEASFAISDSVYGSTFFMLTGTHGLHV 252
Score = 37.9 bits (84), Expect = 0.18
Identities = 24/72 (33%), Positives = 30/72 (41%)
Frame = +3
Query: 3 VDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTYQGK 182
VD P PF GA G +G A RD+ REGT+QG
Sbjct: 11 VDPSPWPFVGASGAFLFTSGAVILFHYNDYRLALTGLFLIIITASAWWRDVIREGTHQGH 70
Query: 183 HTILVNKGLR*G 218
HT +V +GL+ G
Sbjct: 71 HTQVVVRGLKLG 82
>UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1;
Hanseniaspora uvarum|Rep: Cytochrome c oxidase subunit 3
- Hanseniaspora uvarum (Yeast)
Length = 262
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
++P IE+G P I ++PLLNTI+L+ SG TVT +HH I ++ + +F+
Sbjct: 108 MNPTIELGLQWAPLDIVKVEAMELPLLNTILLLSSGATVTLSHHKWINGDYKNSTIAMFI 167
Query: 467 TILLGFYFTILQ 502
T LL F + Q
Sbjct: 168 TTLLVVVFVVFQ 179
Score = 37.5 bits (83), Expect = 0.24
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 481 ILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++F F + YI A FTI D ++GSTF+ G H+
Sbjct: 173 VVFVVFQVVEYITAQFTITDGVFGSTFYAGTGLHGFHM 210
>UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5;
Eukaryota|Rep: Cytochrome c oxidase subunit 3 -
Acanthamoeba castellanii (Amoeba)
Length = 329
Score = 57.2 bits (132), Expect = 3e-07
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 21/95 (22%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENN-----FSQTK 451
LSP++ +G + PP I NP +IPLLNT+IL+ SG+TVT +HH + + + FS +
Sbjct: 146 LSPSVVLGSVWPPLGINVLNPLKIPLLNTLILLLSGLTVTWSHHVIRDKSWQKFFFSNSN 205
Query: 452 QR----------------LFLTILLGFYFTILQAY 508
LFLT+ LG FT+ Q Y
Sbjct: 206 NEEFKAPLLDNYVICAFALFLTVFLGLEFTVWQGY 240
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+ F+ + F + Y +ASF I D +YGSTF++ G+HV
Sbjct: 224 LFLTVFLGLEFTVWQGYEYYKASFYIYDGVYGSTFYMTTGLHGLHV 269
>UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1;
Xiphinema americanum|Rep: Cytochrome c oxidase subunit 3
- Xiphinema americanum
Length = 249
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2
Query: 347 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQ 502
PFQ+PLLNTI+L+ SGVT T +HH ++ S LF ++LLG YF +LQ
Sbjct: 116 PFQVPLLNTIVLLMSGVTATLSHHEVLAGEKSMW---LFYSLLLGIYFLMLQ 164
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 400 SNMSSSLIDRK*LLTNKTKIIF-NYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQD 576
S ++++L + L K+ +F + + I F + Y + F+I+ ++GS FF+
Sbjct: 130 SGVTATLSHHEVLAGEKSMWLFYSLLLGIYFLMLQGMEYYSSLFSISSSVFGSLFFLGTG 189
Query: 577 FMGIHV 594
F G HV
Sbjct: 190 FHGFHV 195
>UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9;
Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Tulipa
sp. CQ-2001
Length = 239
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P +EIG I PP I +P++IP LNT IL SG VT AHH+++ + L
Sbjct: 110 LAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVA 169
Query: 467 TILLGFYFTILQAYNI 514
T+ L T +++
Sbjct: 170 TLSLALVSTGFHGFHV 185
>UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1;
Acanthocardia tuberculata|Rep: Cytochrome c oxidase
subunit 3 - Acanthocardia tuberculata (tuberculate
cockle)
Length = 278
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQR------LFLTILLG 481
PP I +P++IP +NT IL+ SG+TVT AH + N + TK LF+T++LG
Sbjct: 124 PPLGIKCLSPWKIPAVNTAILVGSGLTVTYAHRAAKSNKYKWTKTNPELTLGLFVTVVLG 183
Query: 482 FYFTILQAY 508
F F LQ Y
Sbjct: 184 FVFLGLQMY 192
>UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11;
Betaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 293
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +2
Query: 335 TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
T PF +P +NT +L+ SGVT+T AHH+L +N+ T ++ T+LLG F +Q Y
Sbjct: 152 TTMTPFWLPTINTALLLSSGVTLTIAHHALRDNHRGLTIAFMWATVLLGIIFLGVQGY 209
>UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Boopidae|Rep: Cytochrome c oxidase subunit 3 -
Heterodoxus macropus (wallaby louse)
Length = 263
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +2
Query: 332 ITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI--ENNFSQTKQRLFLTILLGFYFTILQA 505
I NP +PLL T+IL+ SGV+VT H+ L+ E N S K L +T++LG F LQ
Sbjct: 121 IMSLNPSTVPLLGTMILLSSGVSVTWCHNELMLSEGNLSSMKNSLLITVILGMVFAALQM 180
Query: 506 Y 508
+
Sbjct: 181 W 181
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 436 LLTNKTKIIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
L + K ++ + ++F Y ++FT++D +YGS F++ F G HV
Sbjct: 158 LSSMKNSLLITVILGMVFAALQMWEYFMSTFTMSDGVYGSLFYMMTGFHGFHV 210
>UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1;
Lottia digitalis|Rep: Cytochrome c oxidase subunit 3 -
Lottia digitalis (California fingered limpet)
Length = 280
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSP+ E+G PP I P N + +P LN+ +LI SG T+T A ++ E + + +
Sbjct: 108 LSPSFEVGMTWPPQGIVPPNAWGLPFLNSTLLINSGFTLTWASRAVKEGSKWSAAAGMVM 167
Query: 467 TILLGFYFTILQ 502
TI LG F +Q
Sbjct: 168 TIALGVIFMAVQ 179
>UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;
Parvularcula bermudensis HTCC2503|Rep: Cytochrome c
oxidase, subunit III - Parvularcula bermudensis HTCC2503
Length = 319
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 499
P + P +P+ +P +NT+IL+ SG TVT AHH++ + K L +T+ LG F+
Sbjct: 165 PGPGVEPLSPWGLPFVNTVILLLSGTTVTWAHHAIQVGDKEGFKWGLIVTVALGVIFSFF 224
Query: 500 QAYNI*KLLLPLLIEF 547
Q ++L + F
Sbjct: 225 QGVEYYEVLSQDMFSF 240
>UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1;
Scenedesmus obliquus|Rep: Cytochrome oxidase subunit 3 -
Scenedesmus obliquus
Length = 311
Score = 50.0 bits (114), Expect = 4e-05
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L P I++G PP I P + +P NTI+L+RS T A H++ NN S K L
Sbjct: 124 LMPTIQVGMSWPPVGIVPVHWTALPRTNTILLLRSYFTANAAKHAMDHNNKSLCKLHLRT 183
Query: 467 TILLGFYFTILQ 502
TI LG F Q
Sbjct: 184 TIGLGLLFVYCQ 195
Score = 38.7 bits (86), Expect = 0.10
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 481 ILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+LF Y + Y A+FT +D ++GS F++ F G+HV
Sbjct: 189 LLFVYCQYLEYTGAAFTFSDTVFGSAFYLTTGFHGLHV 226
>UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1;
Vargula hilgendorfii|Rep: Cytochrome c oxidase subunit 3
- Vargula hilgendorfii (Sea firefly) (Cypridina
hilgendorfii)
Length = 259
Score = 49.2 bits (112), Expect = 7e-05
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L P EIG PP I +P PLL T++L+ SG +T +HH++ + Q L
Sbjct: 104 LVPTPEIGLTWPPQGIHIPSPSGAPLLGTLLLLSSGAFLTWSHHAMTTGQDTDVTQGLIW 163
Query: 467 TILLGFYFTILQA 505
++LG F +LQA
Sbjct: 164 CLILGEGFAVLQA 176
>UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3;
Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Pellia
epiphylla
Length = 84
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +1
Query: 460 IFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
I F+ ++F F I Y+EA FTI+D IYGST F A F G HV
Sbjct: 19 IATVFLALVFTGFQGIEYVEAPFTISDGIYGSTSFSATGFHGFHV 63
>UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11;
Rickettsiales|Rep: Cytochrome c oxidase, subunit III -
Anaplasma phagocytophilum (strain HZ)
Length = 285
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +2
Query: 302 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG 481
++ + PP I + + +P +NT+ L+ SG T+T +HH L+ ++ + + L TI LG
Sbjct: 131 KVATVWPPVGIETVSAWSLPFMNTVTLLLSGCTITWSHHYLMIDDIKSSLKMLAFTIGLG 190
Query: 482 FYFTILQ 502
F+ Q
Sbjct: 191 LVFSTFQ 197
>UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1;
gamma proteobacterium HTCC2207|Rep: Cytochrome c oxidase
subunit III - gamma proteobacterium HTCC2207
Length = 313
Score = 46.4 bits (105), Expect = 5e-04
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2
Query: 356 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQA 505
+PL NT+IL+ S VTV AH L NN Q L T+LLG F +LQA
Sbjct: 178 LPLWNTVILVTSSVTVHIAHTGLKNNNRKQFVGWLGFTVLLGLIFLVLQA 227
>UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Rhizophydium sp. 136|Rep: Cytochrome c oxidase subunit 3
- Rhizophydium sp. 136
Length = 275
Score = 46.4 bits (105), Expect = 5e-04
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L+P IEI PP + N +PLLN+++L+ G T AHHS N + T L +
Sbjct: 121 LNPTIEIVTW-PPLGVNSINYLSLPLLNSVLLLSGGWIATWAHHSFFLGNKTNTLIGLII 179
Query: 467 TILLGFYFTILQ 502
++L F +Q
Sbjct: 180 AVILTIIFVYVQ 191
Score = 43.2 bits (97), Expect = 0.005
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 439 LTNKTK----IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
L NKT +I + I+F Y + Y + FTIAD +YGS+FFI GIHV
Sbjct: 167 LGNKTNTLIGLIIAVILTIIFVYVQYLEYSYSEFTIADSVYGSSFFILTGTHGIHV 222
>UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9;
Eukaryota|Rep: Cytochrome oxidase subunit 3 -
Dictyostelium discoideum (Slime mold)
Length = 435
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
LSPNI IG + PP +T ++ +PLLNT++L+ SG +T + L E K L
Sbjct: 159 LSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVL 218
Query: 467 TI 472
+
Sbjct: 219 AV 220
Score = 38.3 bits (85), Expect = 0.14
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 448 KTKIIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
KT++ F ++F Y A F++ D IYGS FF+ F G HV
Sbjct: 322 KTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHV 370
>UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6;
Mermithidae|Rep: Cytochrome c oxidase subunit 3 -
Hexamermis agrotis
Length = 257
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +2
Query: 302 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG 481
E+G P IT N +PLLN+++L+ SGV++T H+L+ + L LTILLG
Sbjct: 109 ELGFQWPSKGITAVNYLSVPLLNSLLLLSSGVSLT-ISHNLMSLDLKSFNLYLGLTILLG 167
Query: 482 FYFTILQ 502
F+ Q
Sbjct: 168 LLFSYCQ 174
>UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12;
Macoma|Rep: Cytochrome c oxidase subunit 3 - Macoma
balthica
Length = 198
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 296 NIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTIL 475
N+ G + PP I P P+ PL NT IL+ SG VT AH ++ ++ + L L +L
Sbjct: 86 NLSSGCLWPPRPIIPVYPWGAPLFNTAILLTSGAAVTWAHRAVAIHDREEAMIPLGLCVL 145
Query: 476 LGFYFTILQ 502
G F Q
Sbjct: 146 AGVVFLRFQ 154
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 481 ILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++F F Y ASFTIAD YGS F++ G HV
Sbjct: 148 VVFLRFQFGEYSTASFTIADSAYGSCFYMLTGLHGSHV 185
>UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;
Gammaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Saccharophagus degradans (strain 2-40 / ATCC 43961
/ DSM 17024)
Length = 304
Score = 43.6 bits (98), Expect = 0.004
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 302 EIGRI*PPSRITPFNPFQ-----IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
E+G++ P F F +PL NTIIL+ S VTV AH L ++N Q L +
Sbjct: 147 ELGKVSGPGENMAFPGFGAMFGWLPLWNTIILLSSSVTVHFAHTGLKKDNKKQFNWWLGI 206
Query: 467 TILLGFYFTILQ 502
T+LLG F LQ
Sbjct: 207 TVLLGIIFLCLQ 218
>UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1;
Globodera pallida|Rep: Cytochrome c oxidase subunit 3 -
Globodera pallida
Length = 257
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L ++++G P + NPF +PLLN+++L+ S + +T +H+ + N FS L
Sbjct: 104 LVTSLDLGFWGVPLGVXKINPFGLPLLNSLLLLSSALILTNSHYFFLANGFSSL--TLLF 161
Query: 467 TILLGFYFTILQAY 508
++ LG F +Q +
Sbjct: 162 SVFLGGVFLGVQGF 175
Score = 38.3 bits (85), Expect = 0.14
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++F+ F+ +F Y +SF+++D YGS FF+A F G HV
Sbjct: 159 LLFSVFLGGVFLGVQGFEYQNSSFSLSDSSYGSIFFLATGFHGFHV 204
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 356 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
+ LLNT +L+ S TV AHH L F+ + L +TI+LG F ++Q++
Sbjct: 659 LALLNTFLLVSSSFTVHFAHHDLRRGRFNPFRFGLLVTIILGVLFFLVQSW 709
>UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit 3 -
Dicyema misakiense
Length = 255
Score = 40.3 bits (90), Expect = 0.034
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 466
L P++ G P ++ F+PF +PLL T +LI S V VT +H S ++ T L
Sbjct: 107 LIPSVWTGFEWPLVGMSFFDPFSLPLLGTSLLISSAVFVTWSHGS---SSLKGTMISLLF 163
Query: 467 TILLGFYFTILQ 502
+ILLG F +Q
Sbjct: 164 SILLGSSFVCIQ 175
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++F+ + F I Y+ +SFTI+ +GS FF+A G+HV
Sbjct: 161 LLFSILLGSSFVCIQFIEYLSSSFTISSSSFGSCFFVATGLHGLHV 206
>UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1;
Hiatella arctica|Rep: Cytochrome c oxidase subunit 3 -
Hiatella arctica
Length = 275
Score = 39.9 bits (89), Expect = 0.045
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 499
PP I + IPLLNT++L+ SGVTVT + N T L +I LG F+ L
Sbjct: 125 PPEGIFVVDYAGIPLLNTVLLVSSGVTVTVGLKAAKHYNRISTLWGLKYSIFLGVIFSCL 184
Query: 500 Q 502
Q
Sbjct: 185 Q 185
Score = 36.7 bits (81), Expect = 0.42
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 463 FNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++ F+ ++F Y E FT+ D +YGS FF+ F G+HV
Sbjct: 173 YSIFLGVIFSCLQLEEYKECYFTMMDGVYGSLFFMMTGFHGLHV 216
>UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
CyoC protein - Wigglesworthia glossinidia brevipalpis
Length = 205
Score = 39.5 bits (88), Expect = 0.059
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +2
Query: 350 FQIPL--LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYF 490
F+IPL L TIIL+ S +T + A S+ +NN +T LF+T++LG F
Sbjct: 64 FEIPLVFLETIILLSSSMTCSIASFSIKKNNKIKTNIWLFITVILGIIF 112
>UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132;
Mytilus|Rep: Cytochrome c oxidase subunit 3 - Mytilus
edulis (Blue mussel)
Length = 265
Score = 39.5 bits (88), Expect = 0.059
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTK-QRLF 463
LSP+ E+G PP I NP L T +LI SG+ VT AH S+ ++ L
Sbjct: 107 LSPSCELGMRWPPPGIRTPNPSSTSLFETGLLISSGLFVTQAHKSMRLKDYDVGPFIGLV 166
Query: 464 LTILLGFYFTILQ 502
+TI+ G F ++Q
Sbjct: 167 VTIVCGTVFFLVQ 179
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 511 YIEASFTIADRIYGSTFFIAQDFMGIHV 594
Y S+TIAD +YGS F++ F G+HV
Sbjct: 183 YYWNSYTIADSVYGSVFYLLTGFHGMHV 210
>UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1;
Trichinella spiralis|Rep: Cytochrome c oxidase subunit 3
- Trichinella spiralis (Trichina worm)
Length = 257
Score = 39.1 bits (87), Expect = 0.078
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 320 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 499
PP+ + +P +P LNTI+LI S TVT +H N + L LT++L F +
Sbjct: 114 PPTSLNMPSPLGVPSLNTILLITSSATVTMSHFQTSLPN-GKPLNWLLLTLMLSIMFITM 172
Query: 500 Q 502
Q
Sbjct: 173 Q 173
>UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1;
Microstomum lineare|Rep: Cytochrome c oxidase subunit 3
- Microstomum lineare
Length = 245
Score = 39.1 bits (87), Expect = 0.078
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 347 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQ 502
P +PLLNT +L+ SGV+VT H L + N + L T+ LG +F + Q
Sbjct: 115 PAGLPLLNTFLLLSSGVSVTLYHSFLFQGNGGLS--YLIYTLFLGVFFELCQ 164
>UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2;
Crassostrea|Rep: Cytochrome c oxidase subunit 3 -
Crassostrea virginica (Eastern oyster)
Length = 290
Score = 38.3 bits (85), Expect = 0.14
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 287 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS-QTKQRLF 463
LSP+IEIG PP+ + + PL NT +L+ S +++ AHH ++ + +
Sbjct: 134 LSPSIEIGGCWPPAGLHCLDWSGTPLHNTALLVMSSGSISSAHHFFMDGEWEFGLGVSYY 193
Query: 464 LTILLGFYF 490
LT+ L + F
Sbjct: 194 LTLYLSYLF 202
Score = 34.3 bits (75), Expect = 2.2
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 469 YFIRILFYYFTSI*YIE---ASFTIADRIYGSTFFIAQDFMGIHV 594
Y L Y F Y+E FTIAD +YGS FF+ G+HV
Sbjct: 193 YLTLYLSYLFIENQYMEYMWLPFTIADGVYGSCFFMLTGLHGLHV 237
>UniRef50_Q7YF37 Cluster: Cytochrome c oxidase subunit 3; n=4;
Venerupis (Ruditapes) philippinarum|Rep: Cytochrome c
oxidase subunit 3 - Venerupis (Ruditapes) philippinarum
Length = 301
Score = 37.5 bits (83), Expect = 0.24
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1
Query: 457 IIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
++ + + +LF + S Y S+TIAD ++GS+F++ F G+HV
Sbjct: 191 MMVSILLGLLFLWVQSEEYYWCSYTIADGVFGSSFYMLTGFHGMHV 236
>UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1;
Strelkovimermis spiculatus|Rep: Cytochrome c oxidase
subunit 3 - Strelkovimermis spiculatus
Length = 257
Score = 37.5 bits (83), Expect = 0.24
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 302 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG 481
E+G + PP I + + LLN+++L+ S +T +H L+ N +K + +TI LG
Sbjct: 110 EVGLMWPPMGINKVDFMTLALLNSVLLLSSAYFLTISHLMLVTLNKMLSKFFMIITIFLG 169
Query: 482 FYF 490
F
Sbjct: 170 MVF 172
Score = 32.7 bits (71), Expect = 6.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 439 LTNKTKIIFNYFIRILFYYFTSI*YIEASFTIADRIYGSTFFIAQDFMGIHV 594
+ +K +I F+ ++F + + Y+ F +D +YGS F++ F HV
Sbjct: 156 MLSKFFMIITIFLGMVFLGYQMMEYMMLEFLWSDSVYGSIFYMTTSFHAFHV 207
>UniRef50_Q9FV97 Cluster: Cytochrome c oxidase subunit III; n=2;
Chlamydomonadaceae|Rep: Cytochrome c oxidase subunit III
- Chlamydomonas reinhardtii
Length = 382
Score = 36.3 bits (80), Expect = 0.55
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 511 YIEASFTIADRIYGSTFFIAQDFMGIHV 594
Y E FTI D YG+TFF+ F G+HV
Sbjct: 305 YNETPFTITDSPYGTTFFVTTGFHGMHV 332
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 35.5 bits (78), Expect = 0.97
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 365 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
LNT+IL+ S V A L S + LF+T+LLG F I Q Y
Sbjct: 691 LNTLILVTSSGVVHKAEQDLHHGRTSWGRLGLFITLLLGAIFMIFQVY 738
>UniRef50_A0GZ74 Cluster: Cytochrome c oxidase, subunit III; n=2;
Chloroflexus|Rep: Cytochrome c oxidase, subunit III -
Chloroflexus aggregans DSM 9485
Length = 278
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 365 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
+NT++L+ S +TV A ++ E N + L LT+LLG F +++ Y
Sbjct: 100 VNTVVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTFLVIKGY 147
>UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1;
Lingula anatina|Rep: Cytochrome c oxidase subunit 3 -
Lingula unguis
Length = 275
Score = 34.3 bits (75), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 511 YIEASFTIADRIYGSTFFIAQDFMGIHV 594
Y A FT+ D IYGS F++ F G+HV
Sbjct: 195 YKSAGFTMQDGIYGSCFYLITGFHGLHV 222
>UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15;
Pectinidae|Rep: Cytochrome c oxidase subunit 3 -
Patinopecten yessoensis (Ezo giant scallop) (Yesso
scallop)
Length = 290
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 511 YIEASFTIADRIYGSTFFIAQDFMGIHV 594
Y A FT+AD IYGS FF G+HV
Sbjct: 178 YYTAKFTMADGIYGSCFFALTGLHGLHV 205
>UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n=6;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide
III - Haloarcula marismortui (Halobacterium marismortui)
Length = 287
Score = 33.5 bits (73), Expect = 3.9
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 362 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
++NT++LI S VT+ +H +L N S+ + L T+LLG F Q Y
Sbjct: 151 IVNTLLLIASSVTLHYSHIALRSGNRSRFLKLLGATLLLGIVFIGGQVY 199
>UniRef50_Q9MLI1 Cluster: Cytochrome c oxidase subunit 3; n=3;
Digenea|Rep: Cytochrome c oxidase subunit 3 -
Paragonimus westermani
Length = 214
Score = 33.1 bits (72), Expect = 5.1
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 353 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
++PLL + +LI S VT T HH + L +T+LLG F +LQ +
Sbjct: 90 ELPLLGSFLLIGSSVTATTYHHC---RGLEISWVFLGVTVLLGLSFVLLQVF 138
>UniRef50_A2T843 Cluster: Cytochrome c oxidase subunit 3; n=18;
Eucestoda|Rep: Cytochrome c oxidase subunit 3 -
Diphyllobothrium latum
Length = 216
Score = 33.1 bits (72), Expect = 5.1
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 326 SRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQA 505
S I+ + +IP + +L+ S ++VT HH + + + L LT LLG F ILQ
Sbjct: 81 SFISLSSSLEIPFMGCFLLLGSSISVTGFHHVMF---WPYSWVLLLLTTLLGSGFIILQL 137
Query: 506 YNI*KLLLPLL 538
+ ++ + L+
Sbjct: 138 FEFNEIFINLI 148
>UniRef50_A6C0L4 Cluster: Cytochrome c oxidase, subunit III; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase,
subunit III - Planctomyces maris DSM 8797
Length = 326
Score = 32.7 bits (71), Expect = 6.8
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 365 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY 508
LNT +LI S V A + NF++ ++ L LT+LL F ++AY
Sbjct: 56 LNTFVLILSSYFVVLALEGMKVENFAKARRYLCLTLLLACLFLGIKAY 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,939,353
Number of Sequences: 1657284
Number of extensions: 6204261
Number of successful extensions: 11281
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 10959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11263
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -