Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0359
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LF57 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_A0CJG7 Cluster: Chromosome undetermined scaffold_2, who...    33   9.0  

>UniRef50_Q6LF57 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 2461

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = +2

Query: 92  TFFFLVYYYNSRILFWKVKFQ*FLIFCK*RVFFFKPDFQINITAFSIRDVCLKKALLIDE 271
           T FF +Y +NS I       + F+   K +VFF + +F +N+  F+  DV  K    I +
Sbjct: 21  TLFFSLYIHNSYIYVGSTNGRIFIFKKKGKVFFDQVNF-VNVIKFATDDVITKNKEYIKK 79

Query: 272 SRK 280
            +K
Sbjct: 80  KKK 82


>UniRef50_A0CJG7 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1699

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = -1

Query: 149 ILPSKIISYYYNNKLEKKMCACTS----VHT*EVKLVYGLIFRKMIYMQLS 9
           ++ S +I+Y+++ + ++K C+CT+        +   + G IFR  I+ ++S
Sbjct: 374 VIRSSLINYFHSKQCQQKQCSCTTTFYIAEPRQANAITGQIFRSFIFEKIS 424


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,679,177
Number of Sequences: 1657284
Number of extensions: 12971354
Number of successful extensions: 25844
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25837
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)