Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0359
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 55  SFTSYVCTLVHAHIFFSSLLL***DIILEGKISIVLD 165
           S T   CTLV A ++ S  +    ++++EG  SI+++
Sbjct: 401 SKTKTFCTLVTALVYCSLAIFVLCELLIEGTTSILIN 437



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 5/22 (22%), Positives = 14/22 (63%)
 Frame = +1

Query: 568 VFCQIILDAEVGLLVNLTQFLI 633
           V C+++++    +L+N+   +I
Sbjct: 422 VLCELLIEGTTSILINVPSLII 443


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 658 LRDLICRL*SKTALSLRATQ 599
           L  ++C +  KT LSLR TQ
Sbjct: 74  LFSVLCEIKEKTVLSLRNTQ 93


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 675 NVLAKSYETSFVGYNQKLR*VYEQ 604
           N+L +S+++ +   NQKL    EQ
Sbjct: 190 NILIRSFKSRYKDLNQKLETACEQ 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,044
Number of Sequences: 336
Number of extensions: 3700
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)