Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0354
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104023-1|AAI04024.1|  403|Homo sapiens TSGA10IP protein protein.     30   7.2  
AY236870-1|AAP41817.1|  701|Homo sapiens MUC19 protein.                30   7.2  
AK093065-1|BAC04041.1|  280|Homo sapiens protein ( Homo sapiens ...    29   9.5  

>BC104023-1|AAI04024.1|  403|Homo sapiens TSGA10IP protein protein.
          Length = 403

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 18/60 (30%), Positives = 21/60 (35%)
 Frame = -3

Query: 182 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVAL 3
           GLGA  AG A    A  GP    T  G  + GS     E   +       G+      AL
Sbjct: 343 GLGAAAAGGAAAGRAAAGPDTACTAAGGPLPGSLRTQREPGPWGGPAQAGGAEAPGATAL 402


>AY236870-1|AAP41817.1|  701|Homo sapiens MUC19 protein.
          Length = 701

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -3

Query: 182 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVAL 3
           G   T  GS   +  T+ P ++ T   T +A  + +TG T G S        T +TGVAL
Sbjct: 102 GSMTTALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVAL 161


>AK093065-1|BAC04041.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35746 fis, clone TESTI2004399, moderately
           similar to APOMUCIN. ).
          Length = 280

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = -3

Query: 170 TMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVAL 3
           T  GS   +  T+ P ++ T   T +A  + +TG T G S        T +TGVAL
Sbjct: 3   TALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVAL 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,748,386
Number of Sequences: 237096
Number of extensions: 762139
Number of successful extensions: 5868
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5857
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)