Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0352
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 143 3e-35
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 69 7e-13
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 67 2e-12
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 67 2e-12
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 67 3e-12
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 62 6e-11
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 59 7e-10
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 45 1e-05
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 42 1e-04
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 42 1e-04
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 39 6e-04
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 39 8e-04
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 38 0.001
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 38 0.002
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 36 0.004
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 0.024
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 29 0.89
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 28 1.2
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 28 1.6
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 27 3.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.6
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 3.6
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 27 3.6
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 26 6.3
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 26 6.3
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 143 bits (346), Expect = 3e-35
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +1
Query: 259 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQ 438
AHVEY+T RHY H DCPGHADYIKNMITG A MDGAI+VV+ATDG MPQTREHLLLA+Q
Sbjct: 107 AHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQ 166
Query: 439 IGIQHVVVFINKVDAADEEMVELV 510
+G++ +VV+INKVD + +M+ELV
Sbjct: 167 VGVKQIVVYINKVDMVEPDMIELV 190
Score = 103 bits (247), Expect = 3e-23
Identities = 50/77 (64%), Positives = 57/77 (74%)
Frame = +2
Query: 23 SGLTPLSIILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKG 202
SGL + R YA++++F R KPH N+GTIGHVDHGKTTLTAAITK LSDL A
Sbjct: 28 SGLINRFTVPARTYADEKVFVRKKPHVNIGTIGHVDHGKTTLTAAITKCLSDLGQASFMD 87
Query: 203 YADIDNAPEEKARGITI 253
Y+ ID APEEKARGITI
Sbjct: 88 YSQIDKAPEEKARGITI 104
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALEGKVLKYGL 623
EME+REL++E G+DGD P++ GSALCALEG+ + GL
Sbjct: 191 EMEMRELLSEYGFDGDNTPIVSGSALCALEGREPEIGL 228
Score = 41.9 bits (94), Expect = 9e-05
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2
Query: 602 QSPEIWADAITKLLKEVDTFIPTPIRELEKPFLMPVESV 718
+ PEI ++ITKL++ VD++I P R+ + PFLM +E V
Sbjct: 222 REPEIGLNSITKLMEAVDSYITLPERKTDVPFLMAIEDV 260
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 68.9 bits (161), Expect = 7e-13
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
V ++TE R + D PGH Y+ NMI G +Q D +LV++A G QTR
Sbjct: 306 VGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTR 365
Query: 415 EHLLLAKQIGIQHVVVFINKVD 480
EH +LA+ GI H+VV INK+D
Sbjct: 366 EHAVLARTQGINHLVVVINKMD 387
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKAR-GITIMWLMS 268
K H N+ IGHVD GK+TL +L + K+ I+ +E + + W +
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGG---NILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALD 292
Query: 269 NTKPNR 286
+T R
Sbjct: 293 STSEER 298
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 67.3 bits (157), Expect = 2e-12
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D AIL++ G QTR
Sbjct: 75 IALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVD 480
EH LLA +G++ ++V +NK+D
Sbjct: 135 EHALLAYTLGVKQLIVAVNKMD 156
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H NV IGHVD GK+T T + ++ K+ + E +G W+
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEATELGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 67.3 bits (157), Expect = 2e-12
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D AIL++ G QTR
Sbjct: 75 IALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVD 480
EH LLA +G++ ++V +NK+D
Sbjct: 135 EHALLAYTLGVKQLIVAVNKMD 156
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H NV IGHVD GK+T T + ++ K+ + E +G W+
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEATELGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 66.9 bits (156), Expect = 3e-12
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L++ G QTR
Sbjct: 75 IALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVD 480
EH LLA +G++ ++V +NK+D
Sbjct: 135 EHALLAYTLGVKQLIVAVNKMD 156
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H NV IGHVD GK+T T + ++ K+ + E +G W+
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEATELGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 62.5 bits (145), Expect = 6e-11
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVV 462
RH DCPGH + M+ G A MD A+L++A + PQT EHL + + ++H+++
Sbjct: 108 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMQLKHIII 167
Query: 463 FINKVDAADEEMVE 504
NKVD E E
Sbjct: 168 LQNKVDLIRESAAE 181
Score = 35.1 bits (77), Expect = 0.010
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 211
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 25 NIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYAN 67
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 58.8 bits (136), Expect = 7e-10
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATD-----GVMP--QTR 414
VA ++++++ Y D PGH D+I MI G + D A+LVV ++ G + QTR
Sbjct: 245 VASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTR 304
Query: 415 EHLLLAKQIGIQHVVVFINKVD 480
EH L + +GI +VV +NK+D
Sbjct: 305 EHAYLLRALGISEIVVSVNKLD 326
Score = 34.3 bits (75), Expect = 0.018
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 74 QIFERT--KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG- 244
+IFE++ KP ++ GHVD GK+T+ I L ++N + + N +G
Sbjct: 167 EIFEQSNPKPVVHLVVTGHVDSGKSTMLGRIMFELGEIN---SRSMQKLHNEAANSGKGS 223
Query: 245 ITIMWLMSNTKPNR 286
+ WL+ T+ R
Sbjct: 224 FSYAWLLDTTEEER 237
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +1
Query: 259 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQ 438
A + + + D PGHAD+ + A +DGA+ ++ + GV QT+ A +
Sbjct: 84 AAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQATK 143
Query: 439 IGIQHVVVFINKVDAADEEMVELVR 513
GI V+F+NK+D + +R
Sbjct: 144 RGIPK-VIFVNKMDRVGSSLGSTIR 167
Score = 34.7 bits (76), Expect = 0.014
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD-----IDNAPEEKARGITI 253
NVG I H+D GKTTLT K+L G D +D P E+ RGITI
Sbjct: 30 NVGIIAHIDAGKTTLT---EKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITI 81
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH D+ + DGA++VV +GV QT L A I+ VVV +NKVD
Sbjct: 104 DSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVV-VNKVDR 162
Query: 484 A 486
A
Sbjct: 163 A 163
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
N+ I HVDHGK+TLT ++ + ++ A+ +D +E+ RG+TI
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTI 70
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH D+ + DGA++VV +GV QT L A I+ VVV +NKVD
Sbjct: 104 DSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVV-VNKVDR 162
Query: 484 A 486
A
Sbjct: 163 A 163
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
N+ I HVDHGK+TLT ++ + ++ A+ +D +E+ RG+TI
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTI 70
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 39.1 bits (87), Expect = 6e-04
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH D+ ++ A +G IL+V A+ G+ QT + +A + ++ +NKVD
Sbjct: 130 DTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQTLSNFYMAFSQNLV-IIPVLNKVD 187
Score = 35.5 bits (78), Expect = 0.008
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
N I H+DHGK+TL+ I K+ +N + +D E+ RGIT+
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNFRNQF-LDKLEVERRRGITV 108
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 38.7 bits (86), Expect = 8e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH D++ + A DG +LVV +GVM T ++ + +V+ +NKVD
Sbjct: 215 DTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINT-TRIIKHAILHDMPIVLVLNKVD 272
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 38.3 bits (85), Expect = 0.001
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQH--VVVFINKV 477
D PGH D+ + + + DGA ++V A +GV QT + + +Q I V++ INK+
Sbjct: 100 DSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQT---ITVLRQAWIDRIKVILVINKM 156
Query: 478 DAADEEM 498
D E+
Sbjct: 157 DRLITEL 163
Score = 29.1 bits (62), Expect = 0.67
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
N + HVDHGKTTL ++ ++ +D +E RGIT+
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITM 70
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV--VVFINKV 477
D PGH D+ + +DGA+LV+ A GV QT + + +Q+ +V + F+NK+
Sbjct: 151 DTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQT---ITVDRQMRRYNVPRISFVNKM 207
Query: 478 D 480
D
Sbjct: 208 D 208
Score = 31.5 bits (68), Expect = 0.13
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 83 ERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGY--ADIDNAPEEKARGI 247
+R K N+G H+D GKTT T + T + D++ + K A +D E+ +GI
Sbjct: 54 KRLKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREKGI 113
Query: 248 TI 253
TI
Sbjct: 114 TI 115
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH + GT+ + AILV+ G+ PQT E + L + VV +NKVD
Sbjct: 555 DTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIRLLRDQKTPFVVA-LNKVD 612
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.9 bits (74), Expect = 0.024
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH + G D +LVVA DGV PQT E + + + VVV + K D
Sbjct: 226 DTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIKHIQSADVP-VVVALTKSD 283
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 107 VGTIGHVDHGKTTLTAAITK 166
V +GHVDHGKTTL A K
Sbjct: 174 VTLMGHVDHGKTTLLDAFRK 193
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 28.7 bits (61), Expect = 0.89
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 562 ILSPSYPISVINSLISISPVLPFPHQRHP 476
+ +PS P ++ NS +S+SP+L P Q+ P
Sbjct: 121 VATPSSP-TISNSFVSVSPLLKRPQQKGP 148
>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 862
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 547 YPISVINSLISISPVLPFPHQRHPLCL*TPPHVEYQSVWQVV 422
Y V S+ S+S + P + P + PP +Q WQ+V
Sbjct: 752 YHPHVDTSIDSLSQISSQPFEMRPTAIPPPPKNAFQRAWQIV 793
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 601 PSRAQRAEPLITGILSPSYPISVINSLISISPVLPFPHQRHPL 473
P Q + P++T ++PS P+SV ++ S VLP Q P+
Sbjct: 222 PQTTQDSSPILT--MAPSTPVSVGSTPPSTPSVLPIAKQLAPM 262
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 131 DQHVRLCQHCNGALYVQRFVFLHN 60
D H+R+ G Y++RFV HN
Sbjct: 475 DYHIRITFLAKGTEYIERFVKAHN 498
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 492 LISGIHFVYEHHHMLNTNLF 433
LIS + F+ EHH + +NLF
Sbjct: 527 LISSLAFLLEHHEVYGSNLF 546
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAITKVL 172
KP +G +G GK+TLT A+ +++
Sbjct: 1249 KPQEKIGIVGRTGAGKSTLTLALFRLI 1275
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQ 357
D HADY K MITG A+
Sbjct: 715 DMHSHADYFKEMITGYAK 732
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 712 LNWHQERFFELSDRCWNECVHFFKKFSDSISPYF 611
+NW FE ++ W++C F +F + YF
Sbjct: 505 VNWE---IFEKVEKSWDQCEEFVAEFRQTEEKYF 535
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 80 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADI 214
F+ K C +GHVD + L A ++ ++ L KKG+ +I
Sbjct: 156 FQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQNI 200
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,982,037
Number of Sequences: 5004
Number of extensions: 59996
Number of successful extensions: 212
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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