Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0352
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 131 4e-31
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 131 4e-31
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 131 4e-31
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 126 2e-29
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 126 2e-29
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 71 8e-13
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 71 8e-13
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 62 4e-10
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 52 6e-07
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 49 4e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 47 1e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 39 0.003
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 39 0.004
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 38 0.007
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.013
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.017
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 34 0.089
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 34 0.089
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.12
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.12
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.27
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 31 1.1
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 29 2.5
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 28 7.8
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 131 bits (317), Expect = 4e-31
Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 262 HVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQI 441
H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAATDG MPQTREHLLLA+Q+
Sbjct: 104 HLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQV 163
Query: 442 GI--QHVVVFINKVD-AADEEMVELV 510
G+ ++VVF+NKVD D E ELV
Sbjct: 164 GVPLDNIVVFMNKVDEVPDAETRELV 189
Score = 98.3 bits (234), Expect = 5e-21
Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 TSTTVLSGLTPLSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS 175
T T + +S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+
Sbjct: 15 TVTLCEQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILA 74
Query: 176 DLNLAQKKGYADIDNAPEEKARGITI 253
A+ + Y DIDNAPEEKARGITI
Sbjct: 75 TSKGAKYRKYEDIDNAPEEKARGITI 100
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALEGKVLKYG 620
EM+IRE + E GY GD PVI GSALCALEGK + G
Sbjct: 190 EMDIREQLNEFGYPGDTCPVIFGSALCALEGKQPEIG 226
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 131 bits (317), Expect = 4e-31
Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 262 HVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQI 441
H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAATDG MPQTREHLLLA+Q+
Sbjct: 105 HLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQV 164
Query: 442 GI--QHVVVFINKVD-AADEEMVELV 510
G+ ++VVF+NKVD D E ELV
Sbjct: 165 GVPLDNIVVFMNKVDEVPDAETRELV 190
Score = 98.3 bits (234), Expect = 5e-21
Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 TSTTVLSGLTPLSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS 175
T T + +S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+
Sbjct: 16 TVTLCEQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILA 75
Query: 176 DLNLAQKKGYADIDNAPEEKARGITI 253
A+ + Y DIDNAPEEKARGITI
Sbjct: 76 TSKGAKYRKYEDIDNAPEEKARGITI 101
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALEGKVLKYG 620
EM+IRE + E GY GD PVI GSALCALEGK + G
Sbjct: 191 EMDIREQLNEFGYPGDTCPVIFGSALCALEGKQPEIG 227
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 131 bits (317), Expect = 4e-31
Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 262 HVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQI 441
H+EY+T +RHY H DCPGHADYIKNMITG AQM+GAILVVAATDG MPQTREHLLLA+Q+
Sbjct: 105 HLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQV 164
Query: 442 GI--QHVVVFINKVD-AADEEMVELV 510
G+ ++VVF+NKVD D E ELV
Sbjct: 165 GVPLDNIVVFMNKVDEVPDAETRELV 190
Score = 98.3 bits (234), Expect = 5e-21
Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 TSTTVLSGLTPLSIILKRHYAE---KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS 175
T T + +S++ RH A K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+
Sbjct: 16 TVTLCEQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILA 75
Query: 176 DLNLAQKKGYADIDNAPEEKARGITI 253
A+ + Y DIDNAPEEKARGITI
Sbjct: 76 TSKGAKYRKYEDIDNAPEEKARGITI 101
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALEGKVLKYG 620
EM+IRE + E GY GD PVI GSALCALEGK + G
Sbjct: 191 EMDIREQLNEFGYPGDTCPVIFGSALCALEGKQPEIG 227
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 126 bits (304), Expect = 2e-29
Identities = 52/85 (61%), Positives = 72/85 (84%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAK 435
VAH+ Y++ R Y HTDCPGH+D+IKNMI GT+QMD A+LV+AATDGVM QT+EHL+LAK
Sbjct: 98 VAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAK 157
Query: 436 QIGIQHVVVFINKVDAADEEMVELV 510
Q+G++++ +FINK D +E+ ++LV
Sbjct: 158 QVGVKNMAIFINKADLVEEDDLDLV 182
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITI
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITI 96
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALEGK 605
EME REL++ G++GD PVI+GSAL ALEG+
Sbjct: 183 EMEARELLSLHGFNGDATPVIRGSALSALEGQ 214
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 126 bits (304), Expect = 2e-29
Identities = 52/85 (61%), Positives = 72/85 (84%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAK 435
VAH+ Y++ R Y HTDCPGH+D+IKNMI GT+QMD A+LV+AATDGVM QT+EHL+LAK
Sbjct: 98 VAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAK 157
Query: 436 QIGIQHVVVFINKVDAADEEMVELV 510
Q+G++++ +FINK D +E+ ++LV
Sbjct: 158 QVGVKNMAIFINKADLVEEDDLDLV 182
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITI
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITI 96
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALEGK 605
EME REL++ G++GD PVI+GSAL ALEG+
Sbjct: 183 EMEARELLSLHGFNGDATPVIRGSALSALEGQ 214
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+ ++T R D PGH D+I NMITGT+Q D AILVV AT G QT+
Sbjct: 238 IGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTK 297
Query: 415 EHLLLAKQIGIQHVVVFINKVDAAD 489
EH LL + +G+ ++V +NK+D D
Sbjct: 298 EHALLLRSLGVTQLIVAVNKLDTVD 322
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+ ++T R D PGH D+I NMITGT+Q D AILVV AT G QT+
Sbjct: 256 IGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTK 315
Query: 415 EHLLLAKQIGIQHVVVFINKVDAAD 489
EH LL + +G+ ++V +NK+D D
Sbjct: 316 EHALLLRSLGVTQLIVAVNKLDTVD 340
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
V ++TE+RH+ D PGH ++ NMI G Q D A+LV++A G QTR
Sbjct: 177 VGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTR 236
Query: 415 EHLLLAKQIGIQHVVVFINKVD 480
EH +L K G++H+V+ +NK+D
Sbjct: 237 EHSMLVKTAGVKHLVILVNKMD 258
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKAR-GITIMWLMS 268
K H N+ +GHVD GK+T+ +++ + K+ + +EK R + W M
Sbjct: 107 KEHINMVFVGHVDAGKSTIGG---QLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 269 NTKPNR 286
R
Sbjct: 164 TNDEER 169
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 70.9 bits (166), Expect = 8e-13
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G QTR
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDAADEEMVE 504
EH LLA+ +G++ ++V NK+D+ + E
Sbjct: 135 EHALLAQTLGVKQLIVACNKMDSTEPPFSE 164
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H N+ IGHVD GK+T T + ++ K+ + +E +G W+
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 70.9 bits (166), Expect = 8e-13
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G QTR
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDAADEEMVE 504
EH LLA+ +G++ ++V NK+D+ + E
Sbjct: 135 EHALLAQTLGVKQLIVACNKMDSTEPPFSE 164
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H N+ IGHVD GK+T T + ++ K+ + +E +G W+
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+LVVA G QTR
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Query: 415 EHLLLAKQIGIQHVV 459
EH LLA+ +G++ +V
Sbjct: 135 EHALLAQTLGVKQLV 149
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H N+ IGHVD GK+T T + ++ K+ + +E +G W+
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
DCPGH+ I+ ++ + D AI+++ G+ PQT EHLLLA + V++ +NK D
Sbjct: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKCDL 137
Query: 484 ADEEMV 501
A++ +
Sbjct: 138 AEKSKI 143
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKV 169
N+G +GHVD GKTTLT I ++
Sbjct: 15 NLGILGHVDSGKTTLTRRIAEL 36
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 286 RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVV 462
RH DCPGH + M+ G A MD A L+VA + PQT EHL + + + H+++
Sbjct: 127 RHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEPCPQPQTSEHLAAVEIMQLNHLMI 186
Query: 463 FINKVDAADE 492
NKVD E
Sbjct: 187 LQNKVDIIKE 196
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 211
N+GTIGHV HGK+TL A + V + + N+ K GYA+
Sbjct: 42 NIGTIGHVAHGKSTLVKAFSGVHTVKFKRELERNITIKLGYAN 84
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +1
Query: 277 TEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV 456
T+ R D PGHA + G D +LVVAA DGV QT + + AK +Q +
Sbjct: 201 TKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDANVQ-L 259
Query: 457 VVFINKVDAADEEMVELVR 513
VV +NK+D + + + +R
Sbjct: 260 VVAVNKIDKPNADPMRAMR 278
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 65 AEKQIFERTKPHCNVGTIGHVDHGKTTLTAAI 160
A + ER P + +GHVDHGKTTL A+
Sbjct: 147 ASPKDLERRPPIVTI--MGHVDHGKTTLLDAM 176
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVA 384
+A +++T + + D PGH D+IKNMITGT+Q D A+LVVA
Sbjct: 75 IALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H N+ IGHVD GK+T T + ++ K+ + +E +G W+
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +1
Query: 286 RHYGHT----DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQH 453
RH G+ D PGH D+ + A DG +L+VAA GV QT + LA + IQ
Sbjct: 98 RHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFEKNIQ- 156
Query: 454 VVVFINKVD--AADEEMVE 504
++ INK+D AD + VE
Sbjct: 157 IIPVINKIDLPGADIKSVE 175
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
N G + HVDHGK+TL + ++ + QK+ +D E+ RGIT+
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQ---MLDKLQVERERGITV 90
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH D+ + DGA++VV GV QT L A I+ V+F+NK+D
Sbjct: 116 DSPGHVDFSSEVTAALGVTDGALVVVDCVSGVCVQTETVLRQAIAERIK-PVLFMNKMDR 174
Query: 484 A 486
A
Sbjct: 175 A 175
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 71 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 250
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 251 I 253
I
Sbjct: 70 I 70
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH D+ + DGA++VV GV QT L A I+ V+F+NK+D
Sbjct: 116 DSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIK-PVLFMNKMDR 174
Query: 484 A 486
A
Sbjct: 175 A 175
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 71 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 250
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 251 I 253
I
Sbjct: 70 I 70
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHL-LLAKQIGIQHVVVFINKVD 480
D PGH + G++ D AILVV G+ PQT E L LL K G V+ +NK+D
Sbjct: 555 DTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQTIESLKLLIK--GKTPFVIALNKID 612
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV--VVFINKV 477
D PGH D+ + +DGA+LV+ GV QT + +Q+ +V + F+NK+
Sbjct: 118 DTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQT---FTVNRQLARYNVPFICFVNKM 174
Query: 478 D 480
D
Sbjct: 175 D 175
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADI----DNAPEEKARGITI 253
N+G H+D GKTT+T I + ++ + +G D+ D E+ RGITI
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITI 100
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLA--QKKGYADIDNAPEEKARGITI 253
N+G I HVD GKTT+T + + +++A KG D E+ RGIT+
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITV 78
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH D+ + +DG ++V+ + GV PQT + + + FINK+D
Sbjct: 96 DTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQSSKFKLP-AHFFINKMD 153
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 34.7 bits (76), Expect = 0.068
Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDG--AILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKV 477
D G A Y K I G A LVVAA G+ TREHL L + I + V I K+
Sbjct: 255 DLAGDAKYQKTTIHGLTGYTPHFACLVVAADRGITWATREHLGLIAALNIP-MFVLITKM 313
Query: 478 DAADEE 495
D D +
Sbjct: 314 DLVDRQ 319
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 34.3 bits (75), Expect = 0.089
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH D+ + + D A+L++ +G+ QT + + G Q +++ INK+D
Sbjct: 89 DSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNG-QAMILVINKIDR 147
Query: 484 ADEEM 498
E+
Sbjct: 148 LRVEL 152
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITM 71
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 34.3 bits (75), Expect = 0.089
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH D+ + + D A+L++ +G+ QT + + G Q +++ INK+D
Sbjct: 89 DSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNG-QAMILVINKIDR 147
Query: 484 ADEEM 498
E+
Sbjct: 148 LRVEL 152
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITM 71
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH ++ M DG +++V A +GVM T + A Q + V + I+K+D
Sbjct: 207 DTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHAIQERLA-VTLCISKID 264
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH ++ M DG +++V A +GVM T + A Q + V + I+K+D
Sbjct: 82 DTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHAIQERLA-VTLCISKID 139
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKV 169
N+G +GHVD GKTTLT I ++
Sbjct: 15 NLGILGHVDSGKTTLTRRIAEL 36
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H N+ IGHVD GK+T T + ++ K+ + +E +G W+
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 263 MSNTK 277
+ K
Sbjct: 60 LDKLK 64
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical protein
F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 71 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 172
KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1352 KQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 71 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 172
KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1352 KQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 307 CPGHADYI--KNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
C G D + K I +M ++ ++ TD + E L K+I ++ VFI K
Sbjct: 729 CEGMEDELEEKENIVKMEEMTKSVTEMSLTDNTISFKSEDDLFKKEIKVEEDEVFIKKEI 788
Query: 481 AADEEMV 501
DEE +
Sbjct: 789 DEDEEEI 795
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,698,492
Number of Sequences: 27780
Number of extensions: 347913
Number of successful extensions: 1114
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -