Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0352
(723 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 72 6e-15
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 72 6e-15
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 72 6e-15
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 71 8e-15
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 48 9e-08
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 37 2e-04
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.9
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 6.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.7
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 71.7 bits (168), Expect = 6e-15
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G QTR
Sbjct: 2 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 61
Query: 415 EHLLLAKQIGIQHVVVFINKVDAAD 489
EH LLA +G++ ++V +NK+D+ +
Sbjct: 62 EHALLAFTLGVKQLIVGVNKMDSTE 86
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 71.7 bits (168), Expect = 6e-15
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G QTR
Sbjct: 18 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 77
Query: 415 EHLLLAKQIGIQHVVVFINKVDAAD 489
EH LLA +G++ ++V +NK+D+ +
Sbjct: 78 EHALLAFTLGVKQLIVGVNKMDSTE 102
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 71.7 bits (168), Expect = 6e-15
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G QTR
Sbjct: 75 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDAAD 489
EH LLA +G++ ++V +NK+D+ +
Sbjct: 135 EHALLAFTLGVKQLIVGVNKMDSTE 159
Score = 31.9 bits (69), Expect = 0.006
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H N+ IGHVD GK+T T + ++ K+ + +E +G W+
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 71.3 bits (167), Expect = 8e-15
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G QTR
Sbjct: 75 IALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDAAD 489
EH LLA +G++ ++V +NK+D D
Sbjct: 135 EHALLAFTLGVKQLIVGVNKMDMTD 159
Score = 31.9 bits (69), Expect = 0.006
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARG-ITIMWL 262
+ K H N+ IGHVD GK+T T + ++ K+ + +E +G W+
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGID---KRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 263 MSNTKPNR 286
+ K R
Sbjct: 60 LDKLKAER 67
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 48.0 bits (109), Expect = 9e-08
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGHA +I G D +LVVAA DGV QT + + +AK + ++V INK+D
Sbjct: 199 DTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVP-IIVAINKIDK 257
Query: 484 ADEEMVEL 507
+ +++++
Sbjct: 258 PNIDIIKV 265
Score = 31.1 bits (67), Expect = 0.011
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAI 160
K H V +GHVDHGKTTL A+
Sbjct: 143 KRHPIVTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 36.7 bits (81), Expect = 2e-04
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKV--LSDLNLAQKKGYADIDNAPEEKARG 244
N+GTIGHV HGK+T+ AI+ V + N ++ +D E+ RG
Sbjct: 44 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLDTRAEDSTRG 92
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 333 EHDYRHSTNGWCYISSSC 386
E DY N W YI S C
Sbjct: 298 ESDYYPDLNEWLYILSGC 315
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2
Query: 608 PEIWADAITKL 640
PE+W DA+T++
Sbjct: 277 PEVWIDAVTQI 287
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 3.9
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2
Query: 608 PEIWADAITKL 640
PE+W DA+T++
Sbjct: 330 PEVWIDAVTQI 340
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 202 SSNSLRSRTHGFQHTS 217
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRNRTHDFQHTS 228
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 202 SSNSLRSRTHGFQHTS 217
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 202 SSNSLRSRTHGFQHTS 217
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 202 SSNSLRNRTHGFQHTS 217
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRNRTHGFQHTS 228
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRNRTHGFQHTS 228
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 202 SSNSLRNRTHGFQHTS 217
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRNRTHGFQHTS 228
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 202 SSNSLRNRTHGFQHTS 217
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 218 SSNSLRNRTHGFQHTS 233
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRNRTHGFQHTS 228
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHGFQHTS 228
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRSRTHDFQHTS 228
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 630 SLNFLKKWTHSFQHLS 677
S N L+ TH FQH S
Sbjct: 213 SSNSLRNRTHGFQHTS 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,609
Number of Sequences: 438
Number of extensions: 4143
Number of successful extensions: 43
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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