Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0352
(723 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 133 1e-31
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 133 1e-31
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 66 2e-11
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 66 2e-11
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 66 2e-11
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 66 2e-11
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 66 3e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 65 5e-11
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 65 5e-11
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 65 5e-11
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 62 3e-10
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 62 3e-10
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 52 4e-07
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 47 1e-05
At5g13650.2 68418.m01585 elongation factor family protein contai... 46 2e-05
At5g13650.1 68418.m01584 elongation factor family protein contai... 46 2e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 45 4e-05
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 44 8e-05
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 44 8e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 43 2e-04
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 42 4e-04
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 39 0.003
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 39 0.003
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 39 0.004
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 39 0.004
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 38 0.009
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.009
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 36 0.021
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 36 0.021
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 36 0.027
At2g27700.1 68415.m03356 eukaryotic translation initiation facto... 35 0.047
At2g31060.1 68415.m03790 elongation factor family protein contai... 32 0.44
At4g26150.1 68417.m03764 zinc finger (GATA type) family protein ... 29 2.4
At2g23220.1 68415.m02773 cytochrome P450, putative 29 3.1
At2g20850.1 68415.m02457 leucine-rich repeat protein kinase, put... 27 9.5
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 133 bits (322), Expect = 1e-31
Identities = 59/85 (69%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQ 438
A VEY+TE RHY H DCPGHADY+KNMITG AQMDGAILVV+ DG MPQT+EH+LLAKQ
Sbjct: 133 ATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQ 192
Query: 439 IGIQHVVVFINKVDAADE-EMVELV 510
+G+ +VVF+NK D D+ E++ELV
Sbjct: 193 VGVPDMVVFLNKEDQVDDAELLELV 217
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +2
Query: 80 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
FER KPH N+GTIGHVDHGKTTLTAA+T L+ + + K Y +ID APEE+ARGITI
Sbjct: 73 FERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITI 130
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALE 599
E+E+REL++ ++GD IP+I GSAL A+E
Sbjct: 218 ELEVRELLSSYEFNGDDIPIISGSALLAVE 247
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 617 WADAITKLLKEVDTFIPTPIRELEKPFLMPVESV 718
W D I +L+ VD +IP P R+ E PFL+ VE V
Sbjct: 262 WVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDV 295
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 133 bits (321), Expect = 1e-31
Identities = 57/85 (67%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 AHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQ 438
AHVEY+T +RHY H DCPGHADY+KNMITG AQMDG ILVV+ DG MPQT+EH+LLA+Q
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180
Query: 439 IGIQHVVVFINKVDAADE-EMVELV 510
+G+ +V F+NKVD D+ E++ELV
Sbjct: 181 VGVPSLVCFLNKVDVVDDPELLELV 205
Score = 87.4 bits (207), Expect = 8e-18
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +2
Query: 80 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
F R KPH NVGTIGHVDHGKTTLTAAITKVL++ A+ + +ID APEEK RGITI
Sbjct: 61 FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 118
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2
Query: 611 EIWADAITKLLKEVDTFIPTPIRELEKPFLMPVESV 718
EI AI KL+ VD +IP P+R L+KPFLMP+E V
Sbjct: 240 EIGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDV 275
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +3
Query: 510 EMEIRELMTEMGYDGDKIPVIKGSALCALEG 602
EME+REL++ + GD IP+I+GSAL AL+G
Sbjct: 206 EMELRELLSFYKFPGDDIPIIRGSALSALQG 236
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G QTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDA 483
EH LLA +G++ ++ NK+DA
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDA 157
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIMWLM 265
+ K H N+ IGHVD GK+T T + L ++ + + A E R W++
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVL 60
Query: 266 SNTKPNR 286
K R
Sbjct: 61 DKLKAER 67
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G QTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDA 483
EH LLA +G++ ++ NK+DA
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDA 157
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIMWLM 265
+ K H N+ IGHVD GK+T T + L ++ + + A E R W++
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVL 60
Query: 266 SNTKPNR 286
K R
Sbjct: 61 DKLKAER 67
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G QTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDA 483
EH LLA +G++ ++ NK+DA
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDA 157
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIMWLM 265
+ K H N+ IGHVD GK+T T + L ++ + + A E R W++
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVL 60
Query: 266 SNTKPNR 286
K R
Sbjct: 61 DKLKAER 67
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
+A +++T + + D PGH D+IKNMITGT+Q D A+L++ +T G QTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 415 EHLLLAKQIGIQHVVVFINKVDA 483
EH LLA +G++ ++ NK+DA
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDA 157
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 86 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIMWLM 265
+ K H N+ IGHVD GK+T T + L ++ + + A E R W++
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVL 60
Query: 266 SNTKPNR 286
K R
Sbjct: 61 DKLKAER 67
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTR 414
V ++TE + D PGH Y+ NMI+G +Q D +LV++A G QTR
Sbjct: 169 VGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTR 228
Query: 415 EHLLLAKQIGIQHVVVFINKVD 480
EH+ LAK +G+ ++V +NK+D
Sbjct: 229 EHVQLAKTLGVSKLIVVVNKMD 250
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAI 160
K H NV IGHVD GK+T+ I
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQI 121
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 277 TEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQH 453
T +RH DCPGH + M+ G A +DGA+L++AA + PQT EHL + ++H
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKH 183
Query: 454 VVVFINKVDAADEE 495
+++ NK+D +E+
Sbjct: 184 IIILQNKIDLINEK 197
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Frame = +2
Query: 29 LTPLSIILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS-------DLNL 187
LT L + K H ++ R + N+GTIGHV HGK+T+ AI+ V + + N+
Sbjct: 18 LTKLDVT-KLHPLFPEVISR-QATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNI 75
Query: 188 AQKKGYAD 211
K GYA+
Sbjct: 76 TIKLGYAN 83
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 277 TEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQH 453
T +RH DCPGH + M+ G A +DGA+L++AA + PQT EHL + ++H
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKH 183
Query: 454 VVVFINKVDAADEE 495
+++ NK+D +E+
Sbjct: 184 IIILQNKIDLINEK 197
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Frame = +2
Query: 29 LTPLSIILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLS-------DLNL 187
LT L + K H ++ R + N+GTIGHV HGK+T+ AI+ V + + N+
Sbjct: 18 LTKLDVT-KLHPLFPEVISR-QATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNI 75
Query: 188 AQKKGYAD 211
K GYA+
Sbjct: 76 TIKLGYAN 83
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 286 RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVV 462
RH DCPGH + M+ G A MDGA+L++AA + PQT EHL + + ++H+++
Sbjct: 121 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANETCPQPQTSEHLAAVEIMQLKHIII 180
Query: 463 FINKVDAADEEM 498
NK+D E +
Sbjct: 181 LQNKIDLIQENV 192
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 211
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 35 NIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYAN 77
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Frame = +1
Query: 256 VAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAAT--------DGVMPQT 411
VA + +++ H D PGH D++ NMI G Q D AILV+ A+ D + QT
Sbjct: 307 VAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQT 366
Query: 412 REHLLLAKQIGIQHVVVFINKVDAA--DEEMVELVR 513
REH + + G++ V+V INK+D +E +L++
Sbjct: 367 REHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIK 402
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITIMWLMSNTKPN 283
N+ +GHVD GK+TL+ + +L ++QK+ + A + W + +
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLG--RISQKQMHKYEKEAKLQGKGSFAYAWALDESAEE 298
Query: 284 RGIMDTLTAQV 316
R T+T V
Sbjct: 299 RERGITMTVAV 309
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 262 HVEYQTEQ-RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAK 435
H +Y+ + RH DCPGH + M+ G A MDGA+L++AA + PQT EHL
Sbjct: 110 HEKYKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLIIAANETCPQPQTAEHLASVD 169
Query: 436 QIGIQHVVVFINKVDAADE 492
+ ++ +++ NK+D E
Sbjct: 170 MMHLKDIIIIQNKIDLIQE 188
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 7/43 (16%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAIT-----KVLSDL--NLAQKKGYAD 211
N+GTIGHV HGK+T+ A++ K S+L N+ K GYA+
Sbjct: 35 NIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYAN 77
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGHA + + G A D +LVVAA DGVMPQT E + A+ + VVV INK D
Sbjct: 274 DTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVP-VVVAINKCD 331
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 107 VGTIGHVDHGKTTLTAAI 160
V +GHVDHGKT+L A+
Sbjct: 222 VTVMGHVDHGKTSLLDAL 239
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH + G D AI+VVAA DG+ PQT E + AK + +V+ INK+D
Sbjct: 558 DTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVP-IVIAINKID 615
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 53 KRHYAEKQIFERTKPHCNVGTI-GHVDHGKTTLTAAITK 166
KR +++ ++ + V TI GHVDHGKTTL I K
Sbjct: 485 KRQTFDEEDLDKLEDRPPVITIMGHVDHGKTTLLDYIRK 523
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH+D+ + +DG +LVV + +G MPQTR L A + G VVV +NK+D
Sbjct: 152 DTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFG-HAVVVVVNKID 209
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +2
Query: 68 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 238
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 74 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 129
Query: 239 RGITIM 256
RGITI+
Sbjct: 130 RGITIL 135
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH+D+ + +DG +LVV + +G MPQTR L A + G VVV +NK+D
Sbjct: 151 DTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFG-HAVVVVVNKID 208
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +2
Query: 68 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 238
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 73 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 128
Query: 239 RGITIM 256
RGITI+
Sbjct: 129 RGITIL 134
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH D+ + A +GA+LVV A+ GV QT ++ LA + ++ ++ +NK+D
Sbjct: 158 DTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLE-IIPVLNKIDL 216
Query: 484 ADEEMVELVR 513
E +++R
Sbjct: 217 PGAEPEKVLR 226
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADIDNAPEEKARGITI 253
N I H+DHGK+TL + +V + N K+ + +DN E+ RGITI
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQF--LDNMDLERERGITI 136
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH ++ M DGA+L+V A +GVM T + A Q + +VV INKVD
Sbjct: 215 DTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLP-IVVVINKVDR 273
Query: 484 ADEEM 498
E+
Sbjct: 274 LITEL 278
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
NV +GH+ HGKT + T +S N +K D +E+ R I+I
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISI 192
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PGH ++ M DGA+L+V A +GVM T + A Q + +VV INKVD
Sbjct: 215 DTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLP-IVVVINKVDR 273
Query: 484 ADEEM 498
E+
Sbjct: 274 LITEL 278
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
NV +GH+ HGKT + T +S N +K D +E+ R I+I
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISI 192
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD- 480
D PGH D+ + + GA+LVV A GV QT + LA + + +V INK+D
Sbjct: 141 DTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQTVANFYLAFEANLT-IVPVINKIDQ 199
Query: 481 -AADEEMVE 504
AD E V+
Sbjct: 200 PTADPERVK 208
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPE-EKARGITI 253
N I H+DHGK+TL + ++ + KKG+ + ++ RGIT+
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTI----KKGHGQPQYLDKLQRERGITV 114
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH + G++ D AILVV T G+ PQT E L L + + ++ +NKVD
Sbjct: 115 DTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQTIESLNLLRMRNTEFIIA-LNKVD 172
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 483
D PG+ ++ M DGA+ +V A GVM T + A Q + +VV INKVD
Sbjct: 201 DTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAIQDHLP-IVVVINKVDR 259
Query: 484 ADEEM 498
E+
Sbjct: 260 LITEL 264
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
NV +GH+ HGKT + T +S N K D +E+ R I+I
Sbjct: 126 NVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISI 178
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH + G++ D AILVV G+ PQT E L L + + +V +NKVD
Sbjct: 774 DTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVA-LNKVD 831
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH + G++ D AILVV G+ PQT E L L + + ++ +NKVD
Sbjct: 707 DTPGHESFTNLRSRGSSLCDLAILVVDIKHGLEPQTIESLNLLRMRNTEFIIA-LNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH + G+ D AILVV G+ PQT E L L ++ ++ ++ +NKVD
Sbjct: 562 DTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIA-LNKVD 619
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVV--VFINKV 477
D PGH D+ + T DGA+++V A +GV QT H +L +Q I+ + + +NK+
Sbjct: 80 DSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQT--HAVL-RQAWIEKLTPCLVLNKI 136
Query: 478 D 480
D
Sbjct: 137 D 137
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTL 148
N+ + HVDHGKTTL
Sbjct: 11 NICILAHVDHGKTTL 25
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH D+ + +DGAI + + GV PQ+ A + G+ + F+NK+D
Sbjct: 167 DTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPR-ICFVNKMD 224
Score = 35.1 bits (77), Expect = 0.047
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +2
Query: 92 KPHCNVGTIGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITIMWLM 265
K + N+G + H+D GKTT T I + + + +G A +D +E+ RGITI
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAA 153
Query: 266 SNT---KPNRGIMDT 301
+ T K I+DT
Sbjct: 154 TTTFWDKHRINIIDT 168
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV--VVFINKV 477
D PGH D+ + +DGAILV+ + GV Q+ + + +Q+ V V FINK+
Sbjct: 139 DTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQS---ITVDRQMRRYEVPRVAFINKL 195
Query: 478 D 480
D
Sbjct: 196 D 196
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITI 253
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITI 121
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV--VVFINKV 477
D PGH D+ + +DGAILV+ + GV Q+ + + +Q+ V V FINK+
Sbjct: 139 DTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQS---ITVDRQMRRYEVPRVAFINKL 195
Query: 478 D 480
D
Sbjct: 196 D 196
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITI 253
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITI 121
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PGH D+ + DGA++VV +GV QT L A I+ V+ +NK+D
Sbjct: 104 DSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLT-VNKMD 161
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 104 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 253
N+ I HVDHGK+TLT ++ + D +E RGITI
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITI 70
>At2g27700.1 68415.m03356 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|P39730 Translation initiation factor IF-2
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00009: Elongation factor Tu GTP binding domain,
PF03144: Elongation factor Tu domain 2
Length = 479
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 304 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
D PG+ Y G D AILVV G+ PQT E L L + + ++ +NKVD
Sbjct: 104 DTPGYEFYTNLRSRGLGLCDFAILVVDIMHGLEPQTIECLNLLRMKNTEFIIA-LNKVD 161
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +1
Query: 358 MDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 480
++GAILVV A +G + QT+ L A + G++ +++ +NKVD
Sbjct: 2 VEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILL-LNKVD 41
>At4g26150.1 68417.m03764 zinc finger (GATA type) family protein
Arabidopsis thaliana mRNA for GATA transcription factor
3, PID:e1254739
Length = 352
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 609 GLCLQEHREQNL**QVSCHHHIPSQSSTL*SPSHQFYHFLIS 484
G L H +Q Q HH S S+L SPS ++ FLI+
Sbjct: 25 GSSLHHHLQQQQQQQQHFHHQASSNPSSLMSPSLSYFPFLIN 66
>At2g23220.1 68415.m02773 cytochrome P450, putative
Length = 515
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -1
Query: 258 HIIVIP--RAFSSGALSISA*PFFCARLRSDNTLVIAAVSV 142
H++ +P R F S + S+ P FC RL + T+V+++ S+
Sbjct: 61 HLLKLPLHRTFLSFSQSLGGAPIFCLRLGNRLTVVVSSYSI 101
>At2g20850.1 68415.m02457 leucine-rich repeat protein kinase,
putative contains Pfam domains PF00560: Leucine Rich
Repeat and PF00069: Protein kinase domain
Length = 772
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 675 IGVGMNVSTSLRSLVIASAHISG 607
+GVG+N+ TSL+++ ++ HI G
Sbjct: 89 LGVGLNMFTSLKAMDFSNNHIGG 111
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,605,046
Number of Sequences: 28952
Number of extensions: 317854
Number of successful extensions: 992
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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