Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0351
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    30   0.023
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 450 GVED-RCFMNRAVTLVAYFSRLINGDPMFDSVTEIRVDHARVVFKPNGSQWIGEA 289
           G+E+ + F+ + V L  YF  L+ GD  F+   E+ +    V F+   S  I EA
Sbjct: 368 GIENLQAFIRKHVELAHYFESLVRGDERFEITEEVVL--GLVCFRLKASNEINEA 420


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 366 DSVTEIRVDHARVVFKPNGSQWIG 295
           +  T I  D  +V +  NG QWIG
Sbjct: 379 NGATYIWDDEMKVPYAVNGDQWIG 402



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 366 DSVTEIRVDHARVVFKPNGSQWIG 295
           D+ T +  +  +V F   G+QW+G
Sbjct: 809 DNTTLVWDNEQQVPFAYRGNQWVG 832


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -1

Query: 342 DHARVVFKPNGSQWIG-EAPSS 280
           +H +V +   G+QW+G E P S
Sbjct: 329 EHGKVPYAYKGNQWVGYEDPES 350



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 557 ITISANSFRPFTDSEEDHAATELRRQAEFGLYAE 658
           + +  N FR FT+ ++ H   +L  Q   G +AE
Sbjct: 75  LDVDQNGFRNFTNLKKTHPKVKL--QVAVGGWAE 106


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 304  LASIWFEDYARVVYTNFGDRVKHWITINEPR 396
            +A +++     VV+ N    + +WI+   PR
Sbjct: 1603 VAPLYYHPEDEVVFYNANFSINYWISEGVPR 1633


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,735
Number of Sequences: 336
Number of extensions: 3421
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)