Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0351
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   104   1e-22
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   104   1e-22

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  104 bits (250), Expect = 1e-22
 Identities = 41/81 (50%), Positives = 63/81 (77%)
 Frame = +3

Query: 12  NPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVD 191
           +P  + D S GD++A+SYH  +RDV+M++EL +  YRFSLSW RI+P G+ N ++ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 192 YYNRLINEMLKYGITPMITLF 254
           YY+ LI+E+L+Y ITPM+T++
Sbjct: 122 YYSNLIDELLRYNITPMVTIY 142



 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 33/80 (41%), Positives = 42/80 (52%)
 Frame = +1

Query: 235 PR*LLYSLGLASEAAGTGSFANPLASIWFEDYARVVYTNFGDRVKHWITINEPREICYEG 414
           P   +Y   L  +    G + NP     F+DYAR+V   +GDRVK W T+NEP  +C  G
Sbjct: 137 PMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIWTTVNEPWHVCEHG 196

Query: 415 YGSVHKAPILNATAIGTYLC 474
           YG  + AP  N   I  YLC
Sbjct: 197 YGVDYMAPSYNYPGIPAYLC 216



 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
 Frame = +2

Query: 254 HWDLPQKLQELGA-SPIHWLP----FGLKTTRAWSTRISVTESNIGSPLMSLEK-YATRV 415
           HW+LPQKLQELG  +    +P    +       +  R+ +  + +  P    E  Y    
Sbjct: 143 HWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIW-TTVNEPWHVCEHGYGVDY 201

Query: 416 TALFIKHLSSTPRPSGHICVQECFDSPR*SIHLYNNEFKDKQGGQCGITISANSFRP-FT 592
            A    +    P    ++C      +    +H+Y   F+ +QGG+ GIT+  +   P   
Sbjct: 202 MAPSYNY----PGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGGRMGITLDTSWPEPRDP 257

Query: 593 DSEEDHAATELRRQAEFGLYAEPIFSEEGGF 685
           +S ED  A+E   Q   G +  PIFS+ G +
Sbjct: 258 NSAEDREASERAMQFYVGWFGHPIFSKHGNY 288


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  104 bits (250), Expect = 1e-22
 Identities = 41/81 (50%), Positives = 63/81 (77%)
 Frame = +3

Query: 12  NPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVD 191
           +P  + D S GD++A+SYH  +RDV+M++EL +  YRFSLSW RI+P G+ N ++ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 192 YYNRLINEMLKYGITPMITLF 254
           YY+ LI+E+L+Y ITPM+T++
Sbjct: 122 YYSNLIDELLRYNITPMVTIY 142



 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 33/80 (41%), Positives = 42/80 (52%)
 Frame = +1

Query: 235 PR*LLYSLGLASEAAGTGSFANPLASIWFEDYARVVYTNFGDRVKHWITINEPREICYEG 414
           P   +Y   L  +    G + NP     F+DYAR+V   +GDRVK W T+NEP  +C  G
Sbjct: 137 PMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIWTTVNEPWHVCEHG 196

Query: 415 YGSVHKAPILNATAIGTYLC 474
           YG  + AP  N   I  YLC
Sbjct: 197 YGVDYMAPSYNYPGIPAYLC 216



 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
 Frame = +2

Query: 254 HWDLPQKLQELGA-SPIHWLP----FGLKTTRAWSTRISVTESNIGSPLMSLEK-YATRV 415
           HW+LPQKLQELG  +    +P    +       +  R+ +  + +  P    E  Y    
Sbjct: 143 HWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIW-TTVNEPWHVCEHGYGVDY 201

Query: 416 TALFIKHLSSTPRPSGHICVQECFDSPR*SIHLYNNEFKDKQGGQCGITISANSFRP-FT 592
            A    +    P    ++C      +    +H+Y   F+ +QGG+ GIT+  +   P   
Sbjct: 202 MAPSYNY----PGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGGRMGITLDTSWPEPRDP 257

Query: 593 DSEEDHAATELRRQAEFGLYAEPIFSEEGGF 685
           +S ED  A+E   Q   G +  PIFS+ G +
Sbjct: 258 NSAEDREASERAMQFYVGWFGHPIFSKHGNY 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,125,698
Number of Sequences: 53049
Number of extensions: 617370
Number of successful extensions: 1494
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)