Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0351
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 70 2e-12
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 33 0.16
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 33 0.16
Z74043-6|CAA98543.1| 124|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 28 6.2
U82967-1|AAB40926.1| 124|Caenorhabditis elegans MAX-like-1 homo... 28 6.2
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +3
Query: 6 RDNPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAG 185
R P + D S D++ + + DV ++ E+G+ YRFS+SWSRILP G + INE G
Sbjct: 40 RLEPGRILDNSDPDLSCDGLLKYKEDVALLAEIGVTNYRFSISWSRILPDGTLSTINEEG 99
Query: 186 VDYYNRLINEMLKYGITPMITLF 254
+ +Y L + + I P++TLF
Sbjct: 100 IKFYRDLCLLLKENNIEPVVTLF 122
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/57 (38%), Positives = 25/57 (43%)
Frame = +2
Query: 515 YNNEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQAEFGLYAEPIFSEEGGF 685
Y+ +K Q G GIT P TDS+ED A R F EPI S G F
Sbjct: 219 YDQNYKPTQHGILGITNGGRFCFPATDSQEDIEACNRARDWLFNFTIEPILSGSGDF 275
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 319 FEDYARVVYTNFGDRVKHWITINEPREICYEGYGSVHK 432
FE +A + + FGD VK WIT N EI + +GS+ K
Sbjct: 146 FEKFADLCFQKFGDLVKTWITYN---EINCQAWGSIVK 180
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +3
Query: 6 RDNPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAG 185
R + D S D++ + DV ++ ++G+ YRFS+SWSRILP G INE G
Sbjct: 40 RSENGRIHDNSDPDLSCEGRLKYKEDVALLSKIGVTSYRFSISWSRILPDGTLKTINEDG 99
Query: 186 VDYYNRLINEMLKYGITPMITLF 254
+ +Y + + GI P++TLF
Sbjct: 100 IQFYRDICLLLRDNGIEPIVTLF 122
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 319 FEDYARVVYTNFGDRVKHWITINE 390
FE +A + + FGD VK WIT NE
Sbjct: 146 FEKFADLCFQKFGDLVKTWITFNE 169
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +2
Query: 515 YNNEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQAEFGLYAEPIFSEEGGF 685
Y +K+ Q G GIT P +DS D A F EPI ++ G F
Sbjct: 219 YQKNYKETQNGLIGITNGGRFCLPASDSPADLDACNRALDWLFNYTIEPILTDSGDF 275
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 549 CPPCLSLNSLLYKCML*RGLSKHSCTQICPDG 454
C S + + +C +G + HSCT++CPDG
Sbjct: 1259 CANSKSCDHISGRCQCPKGYAGHSCTELCPDG 1290
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 549 CPPCLSLNSLLYKCML*RGLSKHSCTQICPDG 454
C S + + +C +G + HSCT++CPDG
Sbjct: 1259 CANSKSCDHISGRCQCPKGYAGHSCTELCPDG 1290
>Z74043-6|CAA98543.1| 124|Caenorhabditis elegans Hypothetical
protein T19B10.11 protein.
Length = 124
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 521 NEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQ 634
++ +D Q G CG + F P + E H A E RR+
Sbjct: 5 SDLEDDQTGHCGSGEHSGPFDPKRHAREQHNALERRRR 42
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 343 YTNFGDRVKHWITINEPREICYEGYGSVHKAPILNATAIGTYLCARMF 486
YT FGD + IT N P+E Y L +I Y+ MF
Sbjct: 292 YTGFGDSIAPTITTNVPKEGLYSTVNVFLMLQSLLGNSIAMYVVYDMF 339
>U82967-1|AAB40926.1| 124|Caenorhabditis elegans MAX-like-1 homolog
protein.
Length = 124
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 521 NEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQ 634
++ +D Q G CG + F P + E H A E RR+
Sbjct: 5 SDLEDDQTGHCGSGEHSGPFDPKRHAREQHNALERRRR 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,986,840
Number of Sequences: 27780
Number of extensions: 317467
Number of successful extensions: 775
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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