Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0351
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   1.0  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   3.1  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   3.1  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    23   4.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   7.1  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   9.4  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 215 DVEVRHNPDDYFIHWDLPQKLQELGAS--PIHWLPFGLKTTRAWSTRISVTESNIG 376
           D  +  NPD +    D  +  Q+  AS  P+H+LPFG         R +V ++ +G
Sbjct: 406 DSAIYPNPDSF----DPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVG 457


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 679 WIPKELVEIVAEKSAK 726
           W+P E+ ++VAE  A+
Sbjct: 29  WVPPEVFDLVAEDKAR 44


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 679 WIPKELVEIVAEKSAK 726
           W+P E+ ++VAE  A+
Sbjct: 29  WVPPEVFDLVAEDKAR 44


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 520 VVQVYALAWAIKTFLHTDMSRWPW 449
           V  +  LAWAI  F  +  S  PW
Sbjct: 75  VYYIVILAWAIFYFFMSMRSELPW 98


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 573 LALMVIPHCPPCLSLNSLLY 514
           L  +++P CP C   + ++Y
Sbjct: 345 LMYVIVPFCPDCCPSDRMVY 364


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 573 LALMVIPHCPPCLSLNSLLY 514
           L  +++P CP C   + ++Y
Sbjct: 345 LMYVIVPFCPDCCPSDRMVY 364


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 573 LALMVIPHCPPCLSLNSLLY 514
           L  +++P CP C   + ++Y
Sbjct: 345 LMYVIVPFCPDCCPSDRMVY 364


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 374 GSPLMSLEKYATRVTALFIKHLSSTPRPSGH 466
           GS +  +  Y +   +  + H+  TP P+GH
Sbjct: 101 GSGMDGMGGYRSASPSPGMGHMGHTPTPNGH 131


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 568 TDGDTALSSLFVLELIV 518
           T+ DT +  LFVL LIV
Sbjct: 60  TNSDTYIGFLFVLGLIV 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,698
Number of Sequences: 438
Number of extensions: 3913
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)