Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0349
         (346 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YVT1 Cluster: ORF MSV161 putative Helothis armigera E...    31   5.3  
UniRef50_Q9Y6C7 Cluster: Loss of heterozygosity 3 chromosomal re...    31   5.3  
UniRef50_A2FYJ2 Cluster: Protein kinase, putative; n=1; Trichomo...    31   6.9  
UniRef50_A2FCA5 Cluster: Putative uncharacterized protein; n=1; ...    31   6.9  
UniRef50_Q9IBT8 Cluster: LORF6; n=1; Gallid herpesvirus 2|Rep: L...    30   9.2  
UniRef50_Q05FG8 Cluster: Branched-chain amino acid aminotransfer...    30   9.2  
UniRef50_Q2R2H4 Cluster: Leucine Rich Repeat family protein; n=2...    30   9.2  
UniRef50_Q7RHB3 Cluster: Putative esterase/lipase hi0193; n=2; P...    30   9.2  

>UniRef50_Q9YVT1 Cluster: ORF MSV161 putative Helothis armigera EPV
           ORF F2 protein, similar to GB:AF019224; n=1; Melanoplus
           sanguinipes entomopoxvirus|Rep: ORF MSV161 putative
           Helothis armigera EPV ORF F2 protein, similar to
           GB:AF019224 - Melanoplus sanguinipes entomopoxvirus
           (MsEPV)
          Length = 93

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 201 NCGYIDFRNYIDFIV*IITYGIHINLIY 118
           N G++    YID I+ +I + IHINLIY
Sbjct: 54  NSGWLLALTYIDIILIVICFLIHINLIY 81


>UniRef50_Q9Y6C7 Cluster: Loss of heterozygosity 3 chromosomal
           region 2 gene A protein; n=1; Homo sapiens|Rep: Loss of
           heterozygosity 3 chromosomal region 2 gene A protein -
           Homo sapiens (Human)
          Length = 94

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -1

Query: 175 LHRFYRLNNNLWHSHQPYLFRNMKLQ*ISKGKQIKYLQVCYN 50
           L+ FY  +NN+ H+H  +   ++  Q  S+G  + +L +C+N
Sbjct: 6   LNTFYIWHNNVLHTHLVFFLPHLLNQPFSRGSFLIWLLLCWN 47


>UniRef50_A2FYJ2 Cluster: Protein kinase, putative; n=1; Trichomonas
           vaginalis G3|Rep: Protein kinase, putative - Trichomonas
           vaginalis G3
          Length = 336

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = -1

Query: 250 RLT*YLLSLMVIVPISQLWLHRFSKLHRFYRLNNNLWHSH 131
           R++  LL L++I+ ++ L+LH   ++HR  R  N L+++H
Sbjct: 13  RMSHSLLPLLLILSMALLYLHSNHEIHRDIRSGNILFNAH 52


>UniRef50_A2FCA5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 170

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = -1

Query: 238 YLLSLMVIVPISQLWLHRFSKLHRFY--RLNNNLWHSHQPYLFRNMKLQ*ISKGKQIKYL 65
           Y++  +V+  I +    + + +  +Y  R+NN++ + + P  F+N      S GKQIK++
Sbjct: 20  YIVMNVVLFVIDKNESQQANPIKNYYANRINNSVANPYMPDSFKNSIRGIFSSGKQIKHV 79

Query: 64  QVCYNGIKLFFFTED 20
           Q     IK++    D
Sbjct: 80  Q---KQIKIWLIVSD 91


>UniRef50_Q9IBT8 Cluster: LORF6; n=1; Gallid herpesvirus 2|Rep:
           LORF6 - Meleagrid herpesvirus 1 (MeHV-1) (Turkey
           herpesvirus)
          Length = 155

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 133 HQPYLFRNMKLQ*ISKGKQIKYLQVCYNGIKL 38
           H  Y+  NM+   IS    IKYL   Y G+KL
Sbjct: 120 HSIYMIENMRRNDISSTAAIKYLYKSYTGLKL 151


>UniRef50_Q05FG8 Cluster: Branched-chain amino acid
           aminotransferase; n=1; Candidatus Carsonella ruddii
           PV|Rep: Branched-chain amino acid aminotransferase -
           Carsonella ruddii (strain PV)
          Length = 297

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -1

Query: 169 RFYRLNNNLWHSHQPYLFRNMKLQ*ISKGKQIKYLQVCYNGIKLFFFTE 23
           RF    NN W       F N+K+        I Y Q C+ GIK F + +
Sbjct: 13  RFINFWNNNWKMGFFIKFSNIKIN--ESSTSINYSQQCFEGIKCFLYNK 59


>UniRef50_Q2R2H4 Cluster: Leucine Rich Repeat family protein; n=2;
           Oryza sativa (japonica cultivar-group)|Rep: Leucine Rich
           Repeat family protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 586

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 199 LWLHRFSKLHRFYRLNNNLWHSHQP 125
           +W+   + L RF RLNNN++H H P
Sbjct: 380 MWIGNCTSL-RFLRLNNNMFHGHIP 403


>UniRef50_Q7RHB3 Cluster: Putative esterase/lipase hi0193; n=2;
           Plasmodium (Vinckeia)|Rep: Putative esterase/lipase
           hi0193 - Plasmodium yoelii yoelii
          Length = 278

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -1

Query: 178 KLHRFYRLNNNLWHSHQPYLFRNMKLQ*ISKGKQIKYLQVCYNGIKLFF 32
           KL++FYR+N N+++S   +   N  L   SKGK       C N  K FF
Sbjct: 7   KLNKFYRINENIYNS---FSCGNNILNYKSKGKICTINGKCVNKNKAFF 52


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,552,866
Number of Sequences: 1657284
Number of extensions: 4860907
Number of successful extensions: 9718
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9718
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)