Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0349
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.88 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   1.5  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   2.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   2.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   3.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   6.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   8.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   8.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    20   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 0.88
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 63  CKYFICFPLLIYCNF 107
           C+ FI FP   YC F
Sbjct: 302 CRAFIIFPTHFYCAF 316


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/26 (30%), Positives = 19/26 (73%)
 Frame = -1

Query: 268 SKLYLFRLT*YLLSLMVIVPISQLWL 191
           +KL LF++T  ++++  +V I+ +W+
Sbjct: 712 TKLLLFKITSVMIAVSGLVYIATVWI 737



 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 66   KYFICFPLLIYCNFIFL 116
            K  IC+ +L+ C ++FL
Sbjct: 1120 KIRICWNVLLNCVYLFL 1136


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 166 FYRLNNNLWHSHQPYLFRNM 107
           FY++N+ ++H    Y F N+
Sbjct: 434 FYKMNHPVYHKDPHYGFHNV 453


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 251 QTDIILIKFNGYCAYKP 201
           QT+++ +K NG C Y P
Sbjct: 105 QTNVV-VKHNGSCLYVP 120


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 251 QTDIILIKFNGYCAYKP 201
           QT+++ +K NG C Y P
Sbjct: 105 QTNVV-VKHNGSCLYVP 120


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 142 WHSHQPYLF 116
           W+ HQP LF
Sbjct: 226 WYQHQPLLF 234


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = -1

Query: 238 YLLSLMVIVPISQLWLHRFSKLHRFYRLNNN 146
           Y+L + +IV  +    +RF +L ++ ++  +
Sbjct: 172 YILQITLIVNYALALKNRFKELQKYLKIETS 202


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = -1

Query: 190 HRFSKLHRFYRLNNNLWHSHQPYLF 116
           HR +       +N + WH H  Y F
Sbjct: 192 HRLAYFREDLGINLHHWHWHLVYPF 216


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -1

Query: 190 HRFSKLHRFYRLNNNLWHSHQPYLFRNMK 104
           HR +       LN + WH H  Y F   +
Sbjct: 192 HRVAYWREDIGLNLHHWHWHLVYPFEGAR 220


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 57  VTMGLNFFFSQKTIENL 7
           + + LNFF S   I+NL
Sbjct: 251 ILVALNFFTSTLEIDNL 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,649
Number of Sequences: 336
Number of extensions: 1503
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)