Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0345
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein. 38 0.038
BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein. 38 0.038
AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein. 38 0.038
X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for ... 31 3.3
M14058-1|AAA51851.1| 705|Homo sapiens C1R protein. 31 3.3
BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1,... 31 3.3
AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of compl... 31 3.3
BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein. 30 5.7
AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens ... 30 5.7
>BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.
Length = 1768
Score = 37.5 bits (83), Expect = 0.038
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = -3
Query: 390 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRERSP-TYATPLMSPYN 214
A +PL LG K PADI+ P + V R+++ P +++ P Y
Sbjct: 1030 AKTPLSALGLKPHNPADILLHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAYG 1089
Query: 213 AR--LESSSTGSSFPADSPKPVPLAVVSLDS 127
L + + G SF + SP ++S DS
Sbjct: 1090 HEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1120
>BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.
Length = 1713
Score = 37.5 bits (83), Expect = 0.038
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = -3
Query: 390 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRERSP-TYATPLMSPYN 214
A +PL LG K PADI+ P + V R+++ P +++ P Y
Sbjct: 975 AKTPLSALGLKPHNPADILLHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAYG 1034
Query: 213 AR--LESSSTGSSFPADSPKPVPLAVVSLDS 127
L + + G SF + SP ++S DS
Sbjct: 1035 HEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1065
>AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein.
Length = 873
Score = 37.5 bits (83), Expect = 0.038
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = -3
Query: 390 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRERSP-TYATPLMSPYN 214
A +PL LG K PADI+ P + V R+++ P +++ P Y
Sbjct: 135 AKTPLSALGLKPHNPADILLHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAYG 194
Query: 213 AR--LESSSTGSSFPADSPKPVPLAVVSLDS 127
L + + G SF + SP ++S DS
Sbjct: 195 HEIPLRNGTLGGSFVSPSPLSTSSPILSADS 225
>X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for
complement component C1r. ).
Length = 705
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 98 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 208
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>M14058-1|AAA51851.1| 705|Homo sapiens C1R protein.
Length = 705
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 98 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 208
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1, r
subcomponent protein.
Length = 705
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 98 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 208
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of
complement component 1 protein.
Length = 705
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 98 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 208
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein.
Length = 1721
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 11/99 (11%)
Frame = -3
Query: 390 ATSPLCTLGTKHRAPADIIDR---------APLPPNRVSNETMKVVVFQRRSRERSPTYA 238
A +PL LG K PADI+ P P + V + V R +++
Sbjct: 976 AKTPLSALGLKPHNPADILLHPTGVTRRWIQPEPRSYVESVARTAVAGPRAQDSEPKSFS 1035
Query: 237 TPLMSPYNAR--LESSSTGSSFPADSPKPVPLAVVSLDS 127
P Y L + + G SF + SP ++S DS
Sbjct: 1036 APATQAYGHEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1074
>AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ90413 fis, clone NT2RP3000063, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 740
Score = 30.3 bits (65), Expect = 5.7
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -3
Query: 363 TKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRERSPTYATPLMSPYNARLESSSTGS 184
+KH +P D+ P N+++ ET V ++ P + S +E+ GS
Sbjct: 11 SKHASPDKWNDK---PKNQLNKETDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGS 67
Query: 183 SFPADSPKPVPL 148
+ +SPKP PL
Sbjct: 68 ALSPESPKPTPL 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,963,476
Number of Sequences: 237096
Number of extensions: 2129791
Number of successful extensions: 4912
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4906
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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