Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0344
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.5  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   2.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.6  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   4.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.5  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   6.0  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 462 ALG*GHNGRVSHDHGGHQ-GHVTNVHWARGHNGGVSHDH 349
           AL  G N  + H H  H  G+    +   G +GG +HDH
Sbjct: 112 ALHLGQNPNLHHHHHHHHHGNNGGGNGGGGGSGGNAHDH 150


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 66  NVDTTRAQMSVLP*SKLPSSHP 131
           N+ T    + VLP SK+P+S+P
Sbjct: 31  NIRTGANNIGVLPASKMPTSYP 52


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 451 GAQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQG 344
           G    G P P+G PG R  +    G   RG P   G
Sbjct: 99  GLSMVGPPGPKGNPGLRGPKGERGGMGDRGDPGLPG 134


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 252  TFDCSGSTLSTGVALAASLMLIRMWTRGV 166
            T  CS     TGV +  S++L RM   GV
Sbjct: 1160 TVHCSAGVGRTGVFITLSIVLERMQYEGV 1188


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 439 QGQPRPRGTPGTRHQRALG*GPQWRGQPRSQGL 341
           QG+  PRG PG   ++ +   P  RG+   +G+
Sbjct: 243 QGEVGPRGFPGRPGEKGVPGTPGVRGERGDKGV 275



 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 506 GQPRPRGHDGH 474
           GQP PRG DG+
Sbjct: 344 GQPGPRGRDGN 354


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +2

Query: 80  ESPDVGPALVEAPIVPSPVHVG---PLVPGQLTP 172
           +S   GP    A + PSP   G   PL PG +TP
Sbjct: 439 QSTSPGPDRSPATLTPSPGIGGPISPLDPGNVTP 472


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,562
Number of Sequences: 2352
Number of extensions: 9002
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)