Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0344
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 36 0.024
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.17
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 33 0.22
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 33 0.22
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 32 0.29
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 0.67
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 30 1.5
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 30 1.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 1.5
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 30 1.5
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 28 4.7
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 28 6.2
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 28 6.2
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 28 6.2
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 28 6.2
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 6.2
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 6.2
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 6.2
AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical ... 27 8.2
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = -1
Query: 456 G*GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDH 277
G G +G HDHGGH H + H H G HDH + + + +G D+
Sbjct: 25 GGGDHG--GHDHGGHD-HGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDHDHGNGGGGGDN 81
Query: 276 GRNSRLFSTF 247
G R F+ F
Sbjct: 82 GWGYRPFTGF 91
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -1
Query: 426 DHGG--HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDH 277
DHGG H GH H GH+ G HDH G+ G+++ ++ G +DH
Sbjct: 23 DHGGGDHGGHDHGGHDHGGHDHG-GHDHGGWG---GHDHHDHHHGGWGGHDH 70
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -1
Query: 450 GHNGRVSHDHGG------HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 295
G G SH HGG H H H+ G G H H Y+ S + YY G
Sbjct: 179 GGGGGGSHHHGGGGGGGGHHHHGGGGHYHGGGGGFHHHHHSSYSGSSSDYSSNNYYGG 236
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/78 (29%), Positives = 30/78 (38%)
Frame = -1
Query: 450 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGR 271
G G HGGH G H G +GG H G+ RS + + Y G S
Sbjct: 47 GGKGGGGGSHGGHGGSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRGLSSG--ST 104
Query: 270 NSRLFSTFDCSGSTLSTG 217
N+ + + S STG
Sbjct: 105 NTSYSKSTPRTNSGYSTG 122
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 447 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGRISNDHG 274
H+ H H G H H GH+G SH H G+ S G+ + A + G +HG
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHG--SHGVHHGHHESHGHGHHAPAHHGH-HGEHG 610
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = -1
Query: 450 GHNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDHRG 343
GH+G HG H+ H H GH+G GV H H G
Sbjct: 578 GHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -1
Query: 450 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGRISNDHG 274
GH+G HG H + H H G H H G+ N++ ++ H
Sbjct: 668 GHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQHT 727
Query: 273 RNS 265
+ S
Sbjct: 728 KKS 730
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -1
Query: 450 GHNGRVSHDHGGHQGHVTNVHWARGHNG-----GVSHDHRG 343
GH+G +HG H GH H A H+G G H H G
Sbjct: 517 GHHG----EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHG 553
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 447 HNGRVSH-DHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRSLGNNYRARYYDGRISNDHG 274
H+ H +HG H GH H A H+G SH H ++ + ++ ++ HG
Sbjct: 413 HHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHG 472
Query: 273 RN 268
+
Sbjct: 473 EH 474
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = -1
Query: 450 GHNGRVSHDHGGHQGHVTNVHWARG---HNGGVSHDHRGYTRSLG 325
GH+G HG H H + H H+ H H G+ S G
Sbjct: 540 GHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHG 584
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 450 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNNYRARYYDGRISNDH 277
GH H DHG GH + H + GH+ + HDH G++ N+ + N H
Sbjct: 360 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHGGNNDNHGHSHSAGSDNHH 418
Query: 276 GRN 268
G +
Sbjct: 419 GHS 421
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 450 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNNYRARYYDGRISNDH 277
GH H DHG GH + H + GH+ + HDH G++ N+ + N H
Sbjct: 378 GHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHGGNNDNHGHSHSAGSDNHH 436
Query: 276 GRN 268
G +
Sbjct: 437 GHS 439
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -1
Query: 432 SHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY---RARYYDGRISNDHGRNSR 262
+HDHG H + H+ G +HDH G++ ++ A + G DHG +
Sbjct: 75 AHDHG----HAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHEDHGHSHG 130
Query: 261 LFSTFDCSGSTLSTGVALAASLMLIRMWTRGVS 163
S TG + R+W +S
Sbjct: 131 AESAKQVGDEYQYTGFLSFLNDAKTRLWVYAIS 163
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 435 VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 343
V H GGH GHV H H+G H G
Sbjct: 35 VVHTDGGHHGHVDTHHHEESHHGEHHGGHHG 65
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 429 HDHGGHQGHV-TNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRN 268
H GGH GH+ T+ H H+GG H G+ G +Y + Y HG +
Sbjct: 38 HTDGGHHGHMDTHHHHDSHHHGG---HHGGHH---GGHYESHYESHHHHGHHGHH 86
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 447 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 340
H+ SH HGGH G H+ + H H G+
Sbjct: 50 HHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHGH 85
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 426 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRNSRLFST 250
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGN 105
Query: 249 FDC 241
C
Sbjct: 106 QGC 108
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 438 RVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRSLGNNYRARYYDGRISNDHGRNSR 262
R H HGGH GH + G +G G S HRG G + R G HG R
Sbjct: 299 RGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRH--GGHGRHGSRSGSPGGRHGHGGR 356
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = -1
Query: 450 GHNGRVSHDH--GGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN--YRARYYDGRISN 283
GH GR H G H H + H RGH G H G++ ++DGR +
Sbjct: 352 GHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPS 411
Query: 282 DHGRN 268
HG +
Sbjct: 412 RHGHH 416
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 429 HDHGGHQGHVTNVHWARGHNG-GVSHDHRG 343
H HGGH GH + G +G G S HRG
Sbjct: 253 HGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 282
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 426 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRNSRLFST 250
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGN 105
Query: 249 FDC 241
C
Sbjct: 106 QGC 108
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = -3
Query: 520 GPQWGVSHDHGDTMDTSPTSTGLGAQWQGQPRPRGTPGTRHQRALG*GPQWR-GQPRSQG 344
GP D D P G + G P P G PG++ + GP R GQP G
Sbjct: 201 GPSGQPGQDGHPGQDGQPGQPGESREVPGAPGPAGQPGSQGEPGPS-GPDGRPGQPGQAG 259
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 162 CPGTRGPTWTGDGTMGAST----RAGPTSGLS*CP 70
CP T G T T +ST R PT+G+S CP
Sbjct: 171 CPRTCGRCSTSSSTTSSSTTCADRVNPTTGVSDCP 205
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = -3
Query: 520 GPQWGVSHDHGDTMDTSPTSTGLG--AQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRS 350
GP HD P + G+G + G P P+G PG Q P GQP S
Sbjct: 161 GPAGEPGHDGAPGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGS 219
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 457 GLGAQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQG 344
G + GQP P G PG R P GQP G
Sbjct: 218 GSSSSEPGQPGPNGQPGPRGPPGQAGSPGGNGQPGGPG 255
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 450 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYR 313
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+
Sbjct: 76 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQ 125
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 450 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYR 313
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+
Sbjct: 580 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQ 629
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 380 GATMAGSATITGATLGPSATITGLGTMMAGSAMITGETA 264
G+T+ G +T++G+T S+ TG T AGS ++G +A
Sbjct: 1021 GSTVTGESTVSGSTASTSSGSTGSST-EAGST-VSGSSA 1057
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -2
Query: 380 GATMAGSATITGATLGPSAT---ITGLGTMMAGS-AMITGET 267
G+T++GS TG+T P +T TG+ T+ S + I+G T
Sbjct: 766 GSTVSGSTGSTGSTNNPGSTDSSTTGISTVSGSSLSTISGST 807
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 450 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRISN 283
G NGR ++ G TN + + HN +H G R G N + Y +G+ SN
Sbjct: 486 GSNGRWRGNN--RNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQSSN 540
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 450 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRISN 283
G NGR ++ G TN + + HN +H G R G N + Y +G+ SN
Sbjct: 388 GSNGRWRGNN--RNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQSSN 442
>AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical
protein Y64G10A.6 protein.
Length = 846
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 80 ESPDVGPALVEAPIVPSPVHVGPLVPGQLTPLVHILINI-NDAASATPVESVEPEQSNVE 256
+S DV L + P P+HV P P L P + D V+SVE + + +E
Sbjct: 722 DSEDV-KLLEDVKCAPGPIHVEPTEPEVLEPAEEPMEEAEEDEEDEDDVDSVEGQTARIE 780
Query: 257 K 259
+
Sbjct: 781 E 781
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,522,582
Number of Sequences: 27780
Number of extensions: 206243
Number of successful extensions: 985
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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