Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0341
         (726 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)        82   4e-16
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)              82   4e-16
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)        77   1e-14
SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   4e-07
SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   1e-06
SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   3e-06
SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   3e-06
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)               37   0.014
SB_16252| Best HMM Match : Astacin (HMM E-Value=2.8e-17)               29   3.8  
SB_37337| Best HMM Match : PGI (HMM E-Value=0)                         28   6.7  
SB_44003| Best HMM Match : DUF658 (HMM E-Value=1.1)                    28   8.9  

>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
          Length = 226

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 38/87 (43%), Positives = 53/87 (60%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQ 182
           LGN RG  Y + H+KL  D+D+ FW FS++E+   DLPAMID+  K  G+  L+Y GHSQ
Sbjct: 56  LGNVRGNTYGKRHVKLPVDSDA-FWDFSFDEMAKYDLPAMIDFVTKTTGQASLYYAGHSQ 114

Query: 183 GTTVFWAMGSLRPEYNSKIIAMQAMLP 263
           GT + +   +  P    K+ A  A+ P
Sbjct: 115 GTMIGFIAFAHNPAVIQKVKAFYALAP 141


>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 668

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 38/87 (43%), Positives = 53/87 (60%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQ 182
           LGN RG  Y + H+KL  D+D+ FW FS++E+   DLPAMID+  K  G+  L+Y GHSQ
Sbjct: 379 LGNVRGNTYGKRHVKLPVDSDA-FWDFSFDEMAKYDLPAMIDFVTKTTGQASLYYAGHSQ 437

Query: 183 GTTVFWAMGSLRPEYNSKIIAMQAMLP 263
           GT + +   +  P    K+ A  A+ P
Sbjct: 438 GTMIGFIAFAHNPAVIQKVKAFYALAP 464



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 508 IGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRL-TNWRVYRSFTPPRYDLSLI 663
           I HTPAG +V+ + H+ Q+  +  F+ YD+G    N   Y   TPP+Y++S +
Sbjct: 545 ISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAV 597


>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
          Length = 991

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 36/87 (41%), Positives = 52/87 (59%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQ 182
           LGN RG  YS AH+K + D+ S+FW ++W+++   DLPAMIDY      + ++ Y+GHSQ
Sbjct: 189 LGNIRGNEYSAAHVKWNKDS-SKFWDWTWQQMAQYDLPAMIDYVTLATSQSQVFYVGHSQ 247

Query: 183 GTTVFWAMGSLRPEYNSKIIAMQAMLP 263
           GT + +   S   E   KI    A+ P
Sbjct: 248 GTLIGFTGFSANQELAKKIKMFFALAP 274



 Score = 33.1 bits (72), Expect = 0.24
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +1

Query: 508 IGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWRVY 624
           + H  +G + + + H+GQ++     ++Y++G   NW  Y
Sbjct: 355 MSHWGSGTSFKNMVHFGQMVTSGKCQKYNYGYFYNWMKY 393


>SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 129

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = +1

Query: 508 IGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWRVYRSFTPPRYDLSLIT 666
           I HTPAG +V+ + HY Q+     F  YD+G+  N + Y   TPP+Y++S IT
Sbjct: 7   ISHTPAGTSVKNMIHYAQMYKSKKFEMYDYGK-DNIKRYGQNTPPQYNISAIT 58


>SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = +3

Query: 87  WEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAMLP 263
           ++E+   DLPAMID+  K  G+  L+Y GHSQGT + +   +  P    K+ A  A+ P
Sbjct: 2   FDEMAKYDLPAMIDFVTKTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAP 60


>SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 508 IGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRL-TNWRVYRSFTPPRYDLSLI 663
           I HTPAG +V+ + H+ Q+  +  F+ YD+G    N   Y   TPP+Y++S +
Sbjct: 7   ISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAV 59


>SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 508 IGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRL-TNWRVYRSFTPPRYDLSLI 663
           I HTPAG +V+ + H+ Q+  +  F+ YD+G    N   Y   TPP+Y++S +
Sbjct: 7   ISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAV 59


>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
          Length = 265

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 120 MIDYTLKVAGKRRLHYIGHSQGT 188
           MIDY L+  G+ +L YIGHSQGT
Sbjct: 1   MIDYVLQTTGQSQLFYIGHSQGT 23



 Score = 35.9 bits (79), Expect = 0.033
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 508 IGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWRVYRSFTPP 642
           + H   G + + I H+ Q++ +N  +++D+G   N + Y   TPP
Sbjct: 148 VSHFFEGTSFKDIVHFSQMMYQNRCQKFDYGEAGNMKRYNKTTPP 192


>SB_16252| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
          Length = 580

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 716 PLHQQRCPRQHSVENRAVMRDRSYLGGVKLL 624
           P+ QQ      S E R  MRDR+YL G +++
Sbjct: 42  PVEQQAFEENASEEKRNAMRDRAYLWGSRVI 72


>SB_37337| Best HMM Match : PGI (HMM E-Value=0)
          Length = 391

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 105 RDLPAMIDYTLKVAGKRRL--HYIGHSQGTTVFWAMGSLRPEYNSKIIA 245
           +D P M+   L+  GK+ L  H++ +  GT +   +  L PE +  IIA
Sbjct: 105 KDGPLMVTEALQPYGKKGLNVHFVSNIDGTHLAKTLAELNPETSLFIIA 153


>SB_44003| Best HMM Match : DUF658 (HMM E-Value=1.1)
          Length = 572

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = -2

Query: 272 SKLREHSLHSNNFAVVFRSQRSHSPKDSSSL*VTNIMKSSFSSNFQSVINHSR 114
           +KLR +S  S + ++   S  S S   SSSL  ++   SS SSN  +V +HSR
Sbjct: 197 NKLRLNSSTSTSSSLSSASSSSLSSCSSSSL--SSFSSSSSSSNSSNVKDHSR 247


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,239,368
Number of Sequences: 59808
Number of extensions: 504923
Number of successful extensions: 1052
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)