Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0341
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    23   2.9  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    23   2.9  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   9.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   9.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   9.0  

>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 121 IAGRSRVPISSQLNFQNSESLSGSNL 44
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 121 IAGRSRVPISSQLNFQNSESLSGSNL 44
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 529 IAVRQIAHYGQLINKNFFRRYDHGRLT 609
           I V +I H  +L+N  F    D GR T
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGRCT 58


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 529 IAVRQIAHYGQLINKNFFRRYDHGRLT 609
           I V +I H  +L+N  F    D GR T
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGRCT 58


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 529 IAVRQIAHYGQLINKNFFRRYDHGRLT 609
           I V +I H  +L+N  F    D GR T
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGRCT 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,782
Number of Sequences: 438
Number of extensions: 4273
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)