Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0341
         (726 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64...    66   2e-11
At2g15230.1 68415.m01737 lipase family protein similar to SP|P07...    64   9e-11
At1g73920.2 68414.m08561 lipase family protein similar to lipase...    39   0.003
At1g73920.1 68414.m08560 lipase family protein similar to lipase...    39   0.003
At1g18460.1 68414.m02303 lipase family protein similar to triacy...    38   0.009
At3g57570.1 68416.m06410 expressed protein                             31   0.59 
At3g15570.1 68416.m01973 phototropic-responsive NPH3 family prot...    31   0.59 
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro...    31   1.0  
At4g03977.1 68417.m00564 hypothetical protein                          29   2.4  
At1g77670.1 68414.m09043 aminotransferase class I and II family ...    29   2.4  
At3g05600.1 68416.m00622 epoxide hydrolase, putative similar to ...    28   7.2  
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar...    28   7.2  
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa...    27   9.6  
At1g10490.1 68414.m01181 expressed protein contains Pfam profile...    27   9.6  

>At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64194
           Lysosomal acid lipase/cholesteryl ester hydrolase
           precursor (EC 3.1.1.13) {Rattus norvegicus}; contains
           Pfam profile PF04083: ab-hydrolase associated lipase
           region
          Length = 418

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 29/67 (43%), Positives = 46/67 (68%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQ 182
           +GN RGT +SR H  L+P   + FW ++W+E+ + DLPAM D+   + G +++HY+GHS 
Sbjct: 134 MGNTRGTRFSRRHKYLNPSQRA-FWNWTWDELVSYDLPAMFDHIHGLTG-QKIHYLGHSL 191

Query: 183 GTTVFWA 203
           GT + +A
Sbjct: 192 GTLIGFA 198


>At2g15230.1 68415.m01737 lipase family protein similar to SP|P07098
           Triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
           {Homo sapiens}; contains Pfam profile PF04083:
           ab-hydrolase associated lipase region
          Length = 393

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 31/86 (36%), Positives = 51/86 (59%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQ 182
           +GN RGT YS  H+ L  D D EFW +SW+++   DL  MI Y   ++   ++  +GHSQ
Sbjct: 110 VGNVRGTRYSYGHVTLS-DTDKEFWDWSWQDLAMYDLAEMIQYLYSISNS-KIFLVGHSQ 167

Query: 183 GTTVFWAMGSLRPEYNSKIIAMQAML 260
           GT + +A  +L   + ++++   A+L
Sbjct: 168 GTIMSFA--ALTQPHVAEMVEAAALL 191



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +1

Query: 508 IGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWRVYRSFTPPRYDLSLITA 669
           + + P   +V+ I H  Q+I K  F +YD+G   N R Y    PP + LS I A
Sbjct: 269 LDYEPHPSSVKNIRHLFQMIRKGTFAQYDYGYFKNLRTYGLSKPPEFILSHIPA 322


>At1g73920.2 68414.m08561 lipase family protein similar to lipase
           GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
          Length = 635

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMID 128
           LGN RG   SR H+  +  +  EFW++S  E GT D+PAMI+
Sbjct: 300 LGNFRGLV-SRDHVNKNISS-KEFWRYSINEHGTEDIPAMIE 339


>At1g73920.1 68414.m08560 lipase family protein similar to lipase
           GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
          Length = 704

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMID 128
           LGN RG   SR H+  +  +  EFW++S  E GT D+PAMI+
Sbjct: 369 LGNFRGLV-SRDHVNKNISS-KEFWRYSINEHGTEDIPAMIE 408


>At1g18460.1 68414.m02303 lipase family protein similar to
           triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
           {Canis familiaris} [SP|P80035]
          Length = 701

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = +3

Query: 3   LGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMID 128
           LGN RG   SR H+K +  +  +FW++S  E  T D+PAMI+
Sbjct: 367 LGNFRGLV-SRDHVKKNISS-KDFWRYSINEHATEDIPAMIE 406


>At3g57570.1 68416.m06410 expressed protein 
          Length = 1057

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 242 CYASYAPVAYLEFNANRLLKLIAPHANSIEALTSLIG 352
           C +S   V  L F+++R+LKLI   A S++   SLIG
Sbjct: 580 CSSSSCTVTGLTFDSDRVLKLIPEWARSVQNWNSLIG 616


>At3g15570.1 68416.m01973 phototropic-responsive NPH3 family protein
           contains NPH3 family domain, Pfam:PF03000
          Length = 452

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = -1

Query: 582 EEIFVDKLSVMCYLSNSNACRCMSYFTGNIVALCMSSLRPAKANNIFVHIAWKNVPSAQN 403
           +E FV  +    Y   S   + M+YF   I  +    +RP    +I  H A K +P    
Sbjct: 17  QETFVGDMEYYTYFDES-CIQDMNYFVKTITGIKSKGIRPDLIGSIIAHYASKWLPDLSG 75

Query: 402 LIPKLVKKSDLPNSS 358
            +  ++  + L + +
Sbjct: 76  NVSAIISSTSLESKN 90


>At5g07770.1 68418.m00889 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 722

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = +1

Query: 568 NKNFFRRYDHGRLTN-W----RVYRSFTPPRYDLSLITALFS 678
           NK+  +R+  G+LTN W    R   + T P +DLS I ALFS
Sbjct: 72  NKSSLKRFQCGKLTNAWEELQRHGEAQTAPEFDLSEIEALFS 113


>At4g03977.1 68417.m00564 hypothetical protein
          Length = 202

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 564 KLSVMCYLSNSNACRCMSYFTGNIVALCMSSLRPAKANNIFVHIAWKNV 418
           KL  M    N +   C +Y  G IV       R  + NN+F+ +AW  V
Sbjct: 148 KLPFMIMDKNKDTLECEAY--GQIVVDLEKRFRAFRKNNVFIALAWWKV 194


>At1g77670.1 68414.m09043 aminotransferase class I and II family
           protein similar to kynurenine aminotransferase
           /glutamine transaminase K GI:1030066 [Rattus norvegicus]
          Length = 440

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 18  GTYYSRA-HIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTV 194
           GTY+  A H     +ND  F ++  EE+G   +P  + Y     GK  + +       T+
Sbjct: 366 GTYFVVADHTPFGMENDVAFCEYLIEEVGVVAIPTSVFYLNPEEGKNLVRFAFCKDEETL 425

Query: 195 FWAMGSLRPEYNSKI 239
             A+  ++ +   K+
Sbjct: 426 RGAIERMKQKLKRKV 440


>At3g05600.1 68416.m00622 epoxide hydrolase, putative similar to
           epoxide hydrolase from [Glycine max] GI:2764806,
           [Arabidopsis thaliana] GI:1109600; contains Pfam profile
           PF00561: hydrolase, alpha/beta fold family
          Length = 331

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query: 51  DPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKR-RLHYIGHSQGTTVFWAMGSLRPE 224
           D D+   F +++   +   DL A++D    VAG + ++  +GH  G  + W +   RPE
Sbjct: 66  DSDSPESFSEYTCLNV-VGDLVALLD---SVAGNQEKVFLVGHDWGAIIGWFLCLFRPE 120


>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
           RNA helicase [Rattus norvegicus] GI:897915; contains
           Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
           Helicase conserved C-terminal domain
          Length = 1166

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 470 CVRQKRITYLCTSPGKMCHQRRISF 396
           C   + I  LCTS GK+ + RR++F
Sbjct: 658 CTPGRMIDILCTSSGKITNLRRVTF 682


>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 zinc
           finger, C3HC4 type (RING finger)
          Length = 492

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -2

Query: 476 LHCVRQKRITYLCTSP--GKMCHQRRISF 396
           LH + QKR+ Y+ T+P   K+ H R +SF
Sbjct: 116 LHWLAQKRVEYIETTPSVSKLSHFRIVSF 144


>At1g10490.1 68414.m01181 expressed protein contains Pfam profile
           PF05127: Putative ATPase (DUF699)
          Length = 1028

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +3

Query: 90  EEIGTR-DLPAMIDYTLKVAGKRRLHYIGHSQGTTV----FWAMGSLRPEYNSKI 239
           E+I  R +LP ++   L+     RLHYIG S G T+    FW      P Y S+I
Sbjct: 677 EQIKPRANLPPLL-VPLRDRRPERLHYIGVSFGLTLDLFRFWRKHKFAPFYISQI 730


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,087,743
Number of Sequences: 28952
Number of extensions: 338621
Number of successful extensions: 850
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)