Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0340
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 34 0.13
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 33 0.23
02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732 31 0.91
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 31 1.2
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 31 1.2
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 31 1.2
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 31 1.2
10_01_0044 - 583349-584044 31 1.2
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 31 1.2
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 31 1.2
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 31 1.2
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 31 1.2
01_01_0410 - 3090744-3091022,3091100-3091630 30 1.6
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 30 2.1
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193 30 2.1
03_02_0816 + 11487811-11488708,11488835-11489235 30 2.1
12_02_0674 - 21745321-21746223,21746229-21747608 29 2.8
03_06_0189 + 32214702-32215154 29 2.8
10_06_0012 - 9586478-9588880 29 4.9
10_01_0308 - 3413275-3413529 29 4.9
04_04_1695 + 35433975-35437040 29 4.9
04_03_1036 - 21895764-21895817,21895928-21895975,21896051-218961... 29 4.9
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 29 4.9
07_01_0034 + 290094-290265,290378-290793 28 6.4
03_05_0541 + 25381403-25382077,25382555-25383904,25386267-253864... 28 6.4
02_01_0286 + 1921049-1921726 28 6.4
02_01_0156 - 1086750-1086920,1087680-1087847,1087935-1088171,108... 28 6.4
09_02_0082 - 4060018-4061604 28 8.5
07_01_0452 - 3418572-3418763,3419140-3419223 28 8.5
03_06_0065 - 31399791-31399874,31399956-31400165,31400407-314005... 28 8.5
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 28 8.5
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = -2
Query: 690 CGLPPHKLCVTVQGLVVTTPPGPAGSKPVTLLGLPPACRPALPTTCAP 547
C L PH LCV V +PP P S T + PPA P +PT AP
Sbjct: 269 CTLAPH-LCVPR----VLSPPAPMPSALATHVPTPPAPAPPVPTPLAP 311
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = -2
Query: 675 HKLCVTVQGLVVTTPPGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLP 508
H++ L+ T PP PA P LPP PA P T PK P P P
Sbjct: 86 HRIPPPPPPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTPTPKF-PSSSANPSPP 140
>02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732
Length = 1050
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 222 PKQPSSYYKWQVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIV 398
PK+ SS + I +N +G LPL + G N + N ++ P ++ +C +V
Sbjct: 371 PKEISSLMNLNILHIDQNNLSGELPLGLCAGGQLQNFTAQDNNLVGPLPTSLLNCKTLV 429
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_01_0044 - 583349-584044
Length = 231
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 506 SVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADH--GVH 342
+VV + +V ++ TG+S DG + +G + N G Q+ DH GVH
Sbjct: 71 TVVQKYQVRVVADVPGTGSSKDGEMKQALGGSAQPSNKGATNGSAQENQGDHSQGVH 127
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 39 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 73
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 182 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 216
>01_06_0544 +
30118208-30118417,30118959-30119063,30119179-30119260,
30119415-30121250,30121327-30121445,30121563-30122006
Length = 931
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 162 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 196
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 302 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 406
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>01_01_0410 - 3090744-3091022,3091100-3091630
Length = 269
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 364 PCWPSPTATLLLWTGVVLPT-VYTTLPSMEFPVSDSSLATFWSGSSTTEGQLGSSPLDWL 540
P W S T L LW G PT L S ++ L F +G G LG + L
Sbjct: 93 PSWTSTTENLYLWCGGWRPTAALHLLYSKSGAQLETQLPVFLAGGGLGAGDLGDLSAEQL 152
Query: 541 Q 543
Q
Sbjct: 153 Q 153
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Frame = -2
Query: 678 PHKLCVTVQGLVVTTPPGPAGSKPVTLLGLPPAC-RPALPTTCA-PKLKPI-KWTRPQLP 508
PHK Q + PP P PV PP C RP P A P + I W P
Sbjct: 171 PHKEMPLPQPTTMEMPPPPVTCTPVVEKPRPPPCARPFYPVDMATPTMVEIPSWPAAPAP 230
Query: 507 LRC**ARPKSCQG 469
C A P QG
Sbjct: 231 PSC-CAPPPCYQG 242
>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
Length = 516
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2
Query: 648 LVVTTPPGPAGSKPVTLLGLPPACRPALPTT 556
LVV PP S T+LG PA PALPT+
Sbjct: 83 LVVVEPPASPTSAAATILGASPA--PALPTS 111
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -2
Query: 702 DHRR--CGLP---PHKLCVTVQGLVVTTPPGPAGSKPVTLLGLPPACRPALPTTCAPKLK 538
+HRR C P P + + GL + PP PA + P L PP P P T A K +
Sbjct: 113 EHRRASCDSPRPTPPAIVARLMGLEESAPPSPAATTPRPLPTRPP---PPPPETAAEKRR 169
Query: 537 PI 532
+
Sbjct: 170 KL 171
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = -1
Query: 625 PSRIQTSNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAPPLLMSQTKKLPRNCPTLGTP 446
PS +T NP+ +ATS S + +++ STP + L + T K+P T +P
Sbjct: 525 PSTPRT-NPLSTATSKIPSTPRTSLLSSSTSKIPSTP-STCELSTATGKIPST--TCTSP 580
Query: 445 LTAVLYRPLARPRQSTTITLQSETAS 368
L+ + + P S T S+T+S
Sbjct: 581 LSTATGKTSSTPSTSPLSTSTSKTSS 606
>03_06_0189 + 32214702-32215154
Length = 150
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 642 VTTPPGPAGSKPVTLLGLPPACRPALPTTCAP 547
VT PP PAG V + LPP P++PT P
Sbjct: 111 VTLPPMPAGIPAVPAVTLPP--MPSIPTVNVP 140
>10_06_0012 - 9586478-9588880
Length = 800
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 318 WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLI 497
W++NG + V P L SD N++++D + N +++T VN + +V L+
Sbjct: 78 WSANGENPVVDPASPELAISSDGNMVILD-QVTKNIIWSTHVN------TRTNHTIVVLL 130
Query: 498 NNGGAI 515
NNG +
Sbjct: 131 NNGNLV 136
>10_01_0308 - 3413275-3413529
Length = 84
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 149 KRPRKTSLCQGTVQTTNTGFSPDVTKTTIKLLQMASQLYPELELQW--KPASLCYCPRLE 322
KR K ++ GT + S +V +T ++LL+ + +PE++++W + A+ Y P
Sbjct: 9 KRAAKLAMEMGTDKVIIGIDSLEVVRTIVQLLEDRLKRFPEIKIKWVQQSANKAY-PFSS 67
Query: 323 QQRKL-RC 343
++R L RC
Sbjct: 68 KERTLNRC 75
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 QGLVVTTPPGPAGSKPVTLLGLPPACRPALPTTCAPK 544
Q +++ PPGPA P + GL +P LP P+
Sbjct: 234 QTVIMPRPPGPAPGPPPSAFGLVET-KPPLPAKMGPR 269
>04_03_1036 -
21895764-21895817,21895928-21895975,21896051-21896154,
21896624-21896721,21897838-21897916,21898039-21898102,
21898176-21898294,21898434-21898686,21899273-21899279,
21899956-21900013,21900300-21900353,21900863-21901055
Length = 376
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -2
Query: 654 QGLVVTTPPGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQ 514
+ ++ PP GS +PP PA P++ P +P K T PQ
Sbjct: 113 KSMMTQAPPNTFGSNSPFPFAMPPQAAPAAPSS-YPYSQPRKDTSPQ 158
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 311 PRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWS 451
P L +Q E +P R+ R + ++ C L W+ S+Q +WS
Sbjct: 812 PTLGEQPAQPTESAEPNRIIPRPKERQDCNQLTWTTAPSLQFLNRWS 858
>07_01_0034 + 290094-290265,290378-290793
Length = 195
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -2
Query: 690 CGLPPH-----KLCVTVQGLVVTTPPGPAGSKPVTLLGLPPA 580
CG+P H KL VTV T P G+ P +PPA
Sbjct: 106 CGVPGHCAAGMKLEVTVAAATATKPRHKKGAAPAAAPAMPPA 147
>03_05_0541 +
25381403-25382077,25382555-25383904,25386267-25386402,
25386642-25387126
Length = 881
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 124 VPHLVDLEETAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGKSTLSGTRTTMETC 294
+P +D E L+S+ G N WL++ N H V + T G ++ E C
Sbjct: 233 MPETID-EFEVNFKALISKVGPGNSEWLYSVYNCRQHWVPVYLRDTFFGDESSKEEC 288
>02_01_0286 + 1921049-1921726
Length = 225
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +2
Query: 503 RRGNWGR-VHLIGFS--LGAHVVGNAGRQAGGRPNRVTGL 613
+R N GR H IG L GN G G RP +VTG+
Sbjct: 179 KRENGGRGFHFIGEGRDLATGGAGNGGGNGGRRPRKVTGI 218
>02_01_0156 -
1086750-1086920,1087680-1087847,1087935-1088171,
1088763-1089073,1089343-1089571
Length = 371
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 591 LPPACRPALPTTCAPKLKPIKWTRPQLPL 505
L P CR T AP +P+ PQLPL
Sbjct: 25 LAPPCRFRPATVAAPPRRPLAIAAPQLPL 53
>09_02_0082 - 4060018-4061604
Length = 528
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 642 VTTPPGPAGSKPVTLLGLPPACRPALPTTCAP 547
V +PP P T + PPA P +PT AP
Sbjct: 169 VLSPPAPTPPVLATHVPTPPAPAPPVPTPLAP 200
>07_01_0452 - 3418572-3418763,3419140-3419223
Length = 91
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 481 KLPRNCPTLGTPL---TAVLYRPLARPRQSTTITLQSET 374
KL NCPT G P T L +PL R + T L S T
Sbjct: 42 KLKINCPTTGLPSVDHTNHLIKPLGCARDANTTALYSTT 80
>03_06_0065 -
31399791-31399874,31399956-31400165,31400407-31400526,
31401166-31401225,31401670-31401879,31402512-31402587,
31403010-31403173,31403254-31403316,31403640-31403727,
31403810-31404460,31405102-31405149,31405334-31405902
Length = 780
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 3/111 (2%)
Frame = -1
Query: 718 VKIPRRPPSVWIAST*ALRYGSGLGCYHPTWPSRIQTSNP-VGSATSLSSSVTDNVRAQA 542
V+ PRR SV ST G+ L W + S+P S + S + R+
Sbjct: 271 VQSPRRLSSVDFLSTATSTQGANLSSAQSVWSPDLYGSSPRCASPEKIMGSQERSPRSSP 330
Query: 541 EANQV--DSTPIAPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTT 395
+ V P APP M K P N + +V + PL P S +
Sbjct: 331 LRSPVLRSKNPSAPPSPM-HPKLFPENHVSRPEGNGSVNFHPLPLPPASVS 380
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 636 TPPGPAGSKP-VTLLGLPPACRPALPTTCAP-KLKPIKWTRPQL 511
+PP A S +PPA RPALP T AP + P T PQL
Sbjct: 137 SPPAKAPSHSHAKTPSMPPAERPALPPTKAPAAISPA--TPPQL 178
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,281,106
Number of Sequences: 37544
Number of extensions: 598646
Number of successful extensions: 2360
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2355
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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