Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0340
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 45 7e-05
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 37 0.019
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 36 0.033
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 32 0.40
SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 30 2.2
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_29028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5) 29 5.0
SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_37296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_28019| Best HMM Match : KNOX2 (HMM E-Value=0.24) 28 6.6
SB_884| Best HMM Match : KNOX2 (HMM E-Value=0.24) 28 6.6
SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26) 28 6.6
SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7) 28 8.7
SB_58186| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 28 8.7
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 8.7
SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +3
Query: 255 VNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYN 434
V ++ S Y+G FVI HG+ +G+++ +R ALL D NV++ DW A+G+Y
Sbjct: 90 VKKLKASTYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYW 149
Query: 435 TAVNGVPSVG 464
A VG
Sbjct: 150 QATANTRLVG 159
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 267 RNSN-YNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANG--LYNT 437
RNS + G+ L +I+HG+ +GN + ++R LL NVI VDW+ A+G LY+
Sbjct: 14 RNSTAFRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHV 73
Query: 438 AVNGVPSVGQFLGNFL 485
A VG L +
Sbjct: 74 AAGNTRVVGAQLAELI 89
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 521 RVHLIGFSLGAHVVGNAGRQAGGRPNRVT 607
RVHLIG SLGAHV G AG + G+ R+T
Sbjct: 102 RVHLIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Frame = +2
Query: 527 HLIGFSLGAHVVGNAGR---QAGGRPNRVTGLD 616
+L+GFSLGAH+ G GR + G + NR+TGLD
Sbjct: 690 YLVGFSLGAHISGYVGRRIAKTGQKLNRITGLD 722
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 354 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGG 509
IR AL+ D NVI DW A Y A VG + + +L N G
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTG 683
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 518 GRVHLIGFSLGAHVVGNAG---RQAGGRPNRVTGLD 616
G H IGFSLGAH+ G G ++ G +R+TGLD
Sbjct: 171 GAFHSIGFSLGAHISGYVGQRLKRIGRHLDRITGLD 206
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 354 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGA 512
++ LL SD NVI+VDW A Y AV VG + F+ +++ G+
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGS 167
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +2
Query: 524 VHLIGFSLGAHVVGNAGR---QAGGRPNRVTGLD 616
VH+IGFS GAHV G GR + G +R+T LD
Sbjct: 191 VHVIGFSFGAHVAGYVGRRMKKRGRMIDRITALD 224
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 95 DTFGCLMARVFLTSLTWKKRPRKTSLCQGTVQTTNTGFSPDVTKTTIKL 241
+T G L VF+ L K+P K S Q T QTT T S + ++ + +
Sbjct: 641 ETGGVLANSVFVIRLGNSKQPHKASHSQTTAQTTQTSSSSEASQNSFSI 689
>SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 35 LAMLSP*SLETTVTMWKV*ADTFGCLMARVFLTSLTWKKRPRKTSLC 175
L+++ S + T+ ++ FGC A ++ + W K+P + SLC
Sbjct: 87 LSLVGVASFQAPTTLTRLVLLAFGCGAAMLWFCGIVWSKKPSERSLC 133
>SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 584
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 634 PTWPSRIQTSNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAPPLLMSQTKKLP 473
PT PS I TS P A S+ S ++ + STP+ PPLL + T P
Sbjct: 282 PTPPSSIATSQP---AVSVPSGMSPALIGSLGTTP-GSTPLPPPLLSNSTSSKP 331
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 663 VTVQGLVVTTPPG-PAGSKPVTLLGLPPA-CRPALPTTCAPKLKPIKWTRPQLP 508
VT T PP P KP T PP P P P PI+ TRP +P
Sbjct: 884 VTKNPKTTTAPPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVP 937
>SB_29028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 714
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 509 PSVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQ 369
PS + E + V K TGNS + +T +H+ N A+GDG+
Sbjct: 450 PSRLKETGKGVMKATKVTGNSFNSRRSVRTVETELMHSGNSALGDGK 496
>SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 148 ETAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGKSTLSGTRTTMETC 294
E E ++ NG +Y LF RRNQ N + + +S ++ R+ +TC
Sbjct: 94 ELMEAHCVIETNGIYERY-LFNRRNQENRESV---ESFIAALRSLAKTC 138
>SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5)
Length = 191
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 308 CPRLEQQRKLRCEHHDPPRLAGRLRLQ--RYCCGLAWSC 418
CP LR H PP GR+R+ R+C G+A C
Sbjct: 33 CPLTAIVLGLRASVHLPPLRCGRVRVSTYRHCVGVACEC 71
>SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Frame = -1
Query: 628 WPSRIQTSNPVG--SATSLSSSVTDNVRAQAEANQVDSTPIAPPLLMSQTKKLPRNCPTL 455
W + NP+ S + +++ + A A N T PPLL K L
Sbjct: 179 WEMTLDLQNPLHQESLQGMEPTLSSDHPALALENSQSKTEEPPPLLSEGAPKDAEVSLRL 238
Query: 454 GTPLTAVLYRPLARPRQSTTITLQS-ETASKAGRI 353
L ++ YRP P +QS T + G I
Sbjct: 239 SEELPSIEYRPSGTPEGVAAPDVQSTPTVASTGNI 273
>SB_37296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = -3
Query: 383 VGDGQQGGADHGVHSGVSVAVPAVDNNKERQVSIVVRVPDRVDLPFVIT*WLF 225
VG GGA G VS A +N K R P + L +V T WL+
Sbjct: 392 VGGAGVGGAGVGGAGVVSEVRHAAENRKHLLGVAFARAPADITLKYVATVWLY 444
>SB_28019| Best HMM Match : KNOX2 (HMM E-Value=0.24)
Length = 318
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 19 LIALSSGNAIPMIPGDNSHYVEGVSRYVWMP 111
+ A+ S ++IP + + Y++ +SR++W+P
Sbjct: 223 IYAMGSFSSIPKVCRQFTDYLQAISRFLWVP 253
>SB_884| Best HMM Match : KNOX2 (HMM E-Value=0.24)
Length = 233
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 19 LIALSSGNAIPMIPGDNSHYVEGVSRYVWMP 111
+ A+ S ++IP + + Y++ +SR++W+P
Sbjct: 195 IYAMGSFSSIPKVCRQFTDYLQAISRFLWVP 225
>SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26)
Length = 317
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 494 EPDQKVAKELSDTGNSIDGS-VV*TVGKTTPVHNNNVAVGDGQQGGADHGVHSGV 333
EPD+K KE D G ID S + + PV N VA Q + G H GV
Sbjct: 67 EPDKKPCKEAIDVGVIIDASESINNEQENFPVVLNFVANISKQYQVSQEGTHFGV 121
>SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7)
Length = 836
Score = 27.9 bits (59), Expect = 8.7
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +2
Query: 179 GTVQTTN-TGFSPDVTKTTIKLLQMASQLYPELELQWKPASLCYCPRLEQQRKLRC-EHH 352
G VQ N T + D+ K L M L E +L A L + P + + C H
Sbjct: 22 GIVQCVNITNCTKDIKKHLRSLGVMDVSLDYEAKLLLARAGL-FDPEGKYTKVTICPSHR 80
Query: 353 DPPRLAGRLRLQRYCCGLAWSCQRS 427
D + R + CC L+WS RS
Sbjct: 81 DSHGIRWRSNRKNCCCPLSWSEHRS 105
>SB_58186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +2
Query: 425 SIQHCRQWSSQCRTVPWQLF-----GLAHQQRRGNWGRVHLIGFS 544
S+ C Q S Q R PW+L AH RG W +HL G S
Sbjct: 5 SLFFCTQGSGQVRQHPWRLSSPLQDSTAHPTSRG-WQIIHLCGRS 48
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 27.9 bits (59), Expect = 8.7
Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 5/121 (4%)
Frame = -1
Query: 616 IQTSNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAPPLLMSQTKKLPRNCPTLGTPLTA 437
I T+NP GS ++ + SVT + + TP P + + PT TP T
Sbjct: 895 ITTANP-GSPSTTTKSVT----TPQTSPKTPQTPATLPTTQTPEPGTEKTMPTTATPGTG 949
Query: 436 VLYRPLARPRQSTTITLQSETASKAGRI--MVFTAEFPLLFQP---WTITKRGRFPL*FE 272
PL S T Q G I ++F F L+ W K+ P F
Sbjct: 950 QPTTPLTTSVPSDRSTEQQGEGLSGGSIGGIIFAVIFLLVIMAAVIWYYRKKSLPPASFR 1009
Query: 271 F 269
+
Sbjct: 1010 Y 1010
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -1
Query: 613 QTSNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAPPLLMSQTKKLPRNCPTLGTPLTAV 434
Q + V + + SSS + + E++ + PP K + P+L +P
Sbjct: 141 QYTQMVNAQSQASSSTSTQTNSSTESSAAKTKGEKPPAKPKDAPKSTSDWPSLTSP---- 196
Query: 433 LYRPLARPRQSTTITLQSETASK 365
+P+A STT T S SK
Sbjct: 197 AIQPVAPATPSTTTTAPSTADSK 219
>SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 490 QTKKLPRNCPTLGTPLTAVLYRPLARPRQS-TTITLQSET-ASKAGRIMV 347
Q LPRN P L + T V R +RP TT++ S T S+AG I V
Sbjct: 67 QRTSLPRNRPLLPSRETPVQKRNPSRPISGRTTVSALSRTPGSRAGGITV 116
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 633 PPGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPLRC 499
PP P P PP PAL CAP +++T P L L C
Sbjct: 412 PPPPPPPAPPPPPPPPPPPPPALRLACAP--PRLRFTSPVLHLAC 454
>SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 633 PPGPAGSKPVTLLGLPP-ACRPALPTTCAPKLKPIKWTRPQLP 508
P PAG+ P T G P P L A ++ ++WT P P
Sbjct: 1515 PDSPAGTNPATNPGAPDNVATPKLTVLSANSIR-VQWTPPGKP 1556
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,573,998
Number of Sequences: 59808
Number of extensions: 627092
Number of successful extensions: 3546
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3525
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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