Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0339
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.7  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    24   3.7  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   8.5  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   8.5  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 95  NAGAYVEAIHTDGGLLGIFDRIAH 24
           +AGA V+AI+TD  L   FD + H
Sbjct: 675 DAGAQVDAIYTD--LKAAFDSLPH 696


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 95  NAGAYVEAIHTDGGLLGIFDRIAH 24
           +AGA V+AI+TD  L   FD + H
Sbjct: 60  DAGAQVDAIYTD--LKSAFDSLPH 81


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 383 VNLSSAVLAWTSYCIHD 433
           VNL S  + + SYCI D
Sbjct: 187 VNLPSLGIEYVSYCIED 203


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -3

Query: 200 VVGNAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAGA 84
           ++GN    +GG     +G+   GP   G   AL  N  A
Sbjct: 14  LLGNGSSSSGGGVGLGSGIGGTGPSSPGEESALVGNLTA 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,253
Number of Sequences: 2352
Number of extensions: 12511
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)