Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0339
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   0.85 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 117 TTPPGPSRIQTGNPVGSATSLSSS 188
           TTP  PSR Q+   + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 28/117 (23%), Positives = 37/117 (31%), Gaps = 6/117 (5%)
 Frame = +2

Query: 2   PPLGKSHHEQCGQKYREDHRRCGLPPHKLLRYGSGLGCYHPTWAQ------PDPNR*PCW 163
           P +G  HH    Q     H     PP     Y S +   + + AQ      P P R P  
Sbjct: 345 PTMGPPHHHHHHQTQSLQHLHYRQPPTLSESYSSYVNSMYASGAQFATPCTPSPPRGPGG 404

Query: 164 VCHQPVVXXXXXXXXXXXXXXXGLDPNCRLLVEKNKKKMIFRSVGIAVRSGTVGGET 334
           V    +                G  P  +    KNK K   +  G AV+  +  G T
Sbjct: 405 VPTSVIQAATSSVSDDLYLLELGFPPRSK----KNKLKKPRQGDGAAVKRKSREGST 457


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/41 (26%), Positives = 15/41 (36%)
 Frame = +3

Query: 192 TDNVRAQAEANQVDSTPIAASLLXXXXXXXFLEVLGLQSGP 314
           TD  + + E   +D TP+   LL         E      GP
Sbjct: 334 TDGTKERTEEVALDRTPVTQGLLRVKKEEELQEAPSCGGGP 374


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 193 VTLDDRLVADPTGLPVW 143
           +TLDD++   P   P+W
Sbjct: 643 MTLDDKVFGFPLDRPMW 659


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 193 VTLDDRLVADPTGLPVW 143
           +TLDD++   P   P+W
Sbjct: 643 MTLDDKVFGFPLDRPMW 659


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 233 LDPNCRLLVEKNKKKMIF 286
           L+PN  +LV +N   M+F
Sbjct: 330 LNPNTFILVAENNTTMVF 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,328
Number of Sequences: 438
Number of extensions: 3500
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)