Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0337
(560 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 172 2e-45
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 172 2e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 164 5e-43
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 127 7e-32
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 119 2e-29
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.9
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 6.4
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 21 6.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 8.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 8.5
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.5
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 172 bits (419), Expect = 2e-45
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +3
Query: 3 NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
NPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTD
Sbjct: 127 NPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTD 186
Query: 183 KPLRLPLQDVYKIGGIGTVPVGRVK 257
K LRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 187 KALRLPLQDVYKIGGIGTVPVGRVE 211
Score = 81.8 bits (193), Expect = 4e-18
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 444
HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 238 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
Score = 45.6 bits (103), Expect = 3e-07
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 257 TGVLKPGTIVVFAPANITTEVKSVE 331
TGVLKPG +V FAPA +TTEVKSVE
Sbjct: 212 TGVLKPGMVVTFAPAGLTTEVKSVE 236
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 172 bits (419), Expect = 2e-45
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +3
Query: 3 NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
NPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTD
Sbjct: 184 NPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTD 243
Query: 183 KPLRLPLQDVYKIGGIGTVPVGRVK 257
K LRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 244 KALRLPLQDVYKIGGIGTVPVGRVE 268
Score = 127 bits (306), Expect = 9e-32
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +1
Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 507
HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ
Sbjct: 295 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 352
Score = 45.6 bits (103), Expect = 3e-07
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 257 TGVLKPGTIVVFAPANITTEVKSVE 331
TGVLKPG +V FAPA +TTEVKSVE
Sbjct: 269 TGVLKPGMVVTFAPAGLTTEVKSVE 293
Score = 34.3 bits (75), Expect = 9e-04
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 SNGYTPVLDCHTA 548
SNGYTPVLDCHTA
Sbjct: 354 SNGYTPVLDCHTA 366
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 164 bits (399), Expect = 5e-43
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +3
Query: 3 NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
N A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LIEALDAILPP+RPTD
Sbjct: 184 NTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTD 243
Query: 183 KPLRLPLQDVYKIGGIGTVPVGRVK 257
K LRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 244 KALRLPLQDVYKIGGIGTVPVGRVE 268
Score = 119 bits (287), Expect = 2e-29
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = +1
Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 507
HHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQ
Sbjct: 295 HHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQ 352
Score = 44.0 bits (99), Expect = 1e-06
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 257 TGVLKPGTIVVFAPANITTEVKSVE 331
TG+LKPG +V FAPA +TTEVKSVE
Sbjct: 269 TGILKPGMLVTFAPAALTTEVKSVE 293
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 127 bits (307), Expect = 7e-32
Identities = 55/61 (90%), Positives = 57/61 (93%)
Frame = +3
Query: 3 NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
NPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTD
Sbjct: 111 NPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTD 170
Query: 183 K 185
K
Sbjct: 171 K 171
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 119 bits (287), Expect = 2e-29
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = +1
Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 507
HHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQ
Sbjct: 6 HHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQ 63
Score = 34.3 bits (75), Expect = 9e-04
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 SNGYTPVLDCHTA 548
SNGYTPVLDCHTA
Sbjct: 65 SNGYTPVLDCHTA 77
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 397 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 504
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 212 IQNRWYWYRARRQS*TGVLKPGTIV 286
++NR RA R+ G +KPG+I+
Sbjct: 370 LRNRARKARANRKPNLGDIKPGSII 394
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 74 FG*RLQHVVSVPSRNGHESDSSWV 3
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.4 bits (43), Expect = 6.4
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 364 QVQLLGELRGALHRLYFSSDVGGGKDNNGTWFQHTSLTLPTGTVPIPPI 218
Q+Q L + L + FS+ + N+G F+ S P P+PP+
Sbjct: 1 QIQHLKNIMKPL--MEFSATLDTVVPNSGELFKAGSAEQPKEQEPLPPV 47
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 204 QDVYKIGGIGTVPVGRVKLVC*N 272
+ +YK+G + G V VC N
Sbjct: 788 KQIYKVGNVQAYIDGNVVFVCHN 810
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 396 HVLYVETYIVSRYSFLESFVVLSTDFT 316
HV+ + Y++ R+S F + +TD T
Sbjct: 577 HVVALVLYLLDRFSPFGRFKLANTDGT 603
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 322 LYFSSDVGGGKDNNGTWFQHTSLTLP 245
+Y + VG G ++G W S+T+P
Sbjct: 533 VYACNVVGSGL-SHGNWIYPASMTIP 557
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,240
Number of Sequences: 438
Number of extensions: 4098
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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