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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0337
         (560 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ...   103   1e-22
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ...   103   1e-22
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ...   103   1e-22
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ...   103   1e-22
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,...    44   7e-05
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide...    39   0.002
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,...    38   0.006
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E...    34   0.075
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-...    31   0.40 
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)...    31   0.70 
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ...    30   1.2  
At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family p...    29   2.1  
At3g05990.1 68416.m00684 leucine-rich repeat family protein cont...    29   2.1  
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin...    29   2.8  
At5g19490.1 68418.m02322 repressor protein-related similar to re...    28   4.9  
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi...    28   4.9  
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi...    28   4.9  
At5g10140.1 68418.m01174 MADS-box protein flowering locus F (FLF...    27   6.5  
At1g01060.2 68414.m00007 myb family transcription factor contain...    27   6.5  
At1g01060.1 68414.m00006 myb family transcription factor contain...    27   6.5  
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ...    27   8.6  

>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
           identical to SWISS-PROT:P13905 elongation factor 1-alpha
           (EF-1-alpha) [Arabidopsis thaliana]
          Length = 449

 Score =  103 bits (246), Expect = 1e-22
 Identities = 52/85 (61%), Positives = 60/85 (70%)
 Frame = +3

Query: 3   NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
           NP  + FVPISG+ GDNM+E ST + W+KG              L+EALD I  P RP+D
Sbjct: 184 NPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSD 231

Query: 183 KPLRLPLQDVYKIGGIGTVPVGRVK 257
           KPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 232 KPLRLPLQDVYKIGGIGTVPVGRVE 256



 Score =  102 bits (244), Expect = 2e-22
 Identities = 43/58 (74%), Positives = 55/58 (94%)
 Frame = +1

Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 507
           HHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 283 HHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 340



 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 257 TGVLKPGTIVVFAPANITTEVKSVE 331
           TG++KPG +V FAP  +TTEVKSVE
Sbjct: 257 TGMIKPGMVVTFAPTGLTTEVKSVE 281



 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 513 NGYTPVLDCHTA 548
           NGY PVLDCHT+
Sbjct: 343 NGYAPVLDCHTS 354


>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  103 bits (246), Expect = 1e-22
 Identities = 52/85 (61%), Positives = 60/85 (70%)
 Frame = +3

Query: 3   NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
           NP  + FVPISG+ GDNM+E ST + W+KG              L+EALD I  P RP+D
Sbjct: 184 NPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSD 231

Query: 183 KPLRLPLQDVYKIGGIGTVPVGRVK 257
           KPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 232 KPLRLPLQDVYKIGGIGTVPVGRVE 256



 Score =  102 bits (244), Expect = 2e-22
 Identities = 43/58 (74%), Positives = 55/58 (94%)
 Frame = +1

Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 507
           HHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 283 HHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 340



 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 257 TGVLKPGTIVVFAPANITTEVKSVE 331
           TG++KPG +V FAP  +TTEVKSVE
Sbjct: 257 TGMIKPGMVVTFAPTGLTTEVKSVE 281



 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 513 NGYTPVLDCHTA 548
           NGY PVLDCHT+
Sbjct: 343 NGYAPVLDCHTS 354


>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  103 bits (246), Expect = 1e-22
 Identities = 52/85 (61%), Positives = 60/85 (70%)
 Frame = +3

Query: 3   NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
           NP  + FVPISG+ GDNM+E ST + W+KG              L+EALD I  P RP+D
Sbjct: 184 NPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSD 231

Query: 183 KPLRLPLQDVYKIGGIGTVPVGRVK 257
           KPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 232 KPLRLPLQDVYKIGGIGTVPVGRVE 256



 Score =  102 bits (244), Expect = 2e-22
 Identities = 43/58 (74%), Positives = 55/58 (94%)
 Frame = +1

Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 507
           HHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 283 HHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 340



 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 257 TGVLKPGTIVVFAPANITTEVKSVE 331
           TG++KPG +V FAP  +TTEVKSVE
Sbjct: 257 TGMIKPGMVVTFAPTGLTTEVKSVE 281



 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 513 NGYTPVLDCHTA 548
           NGY PVLDCHT+
Sbjct: 343 NGYAPVLDCHTS 354


>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  103 bits (246), Expect = 1e-22
 Identities = 52/85 (61%), Positives = 60/85 (70%)
 Frame = +3

Query: 3   NPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTD 182
           NP  + FVPISG+ GDNM+E ST + W+KG              L+EALD I  P RP+D
Sbjct: 184 NPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSD 231

Query: 183 KPLRLPLQDVYKIGGIGTVPVGRVK 257
           KPLRLPLQDVYKIGGIGTVPVGRV+
Sbjct: 232 KPLRLPLQDVYKIGGIGTVPVGRVE 256



 Score =  102 bits (244), Expect = 2e-22
 Identities = 43/58 (74%), Positives = 55/58 (94%)
 Frame = +1

Query: 334 HHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQ 507
           HHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 283 HHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQ 340



 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 257 TGVLKPGTIVVFAPANITTEVKSVE 331
           TG++KPG +V FAP  +TTEVKSVE
Sbjct: 257 TGMIKPGMVVTFAPTGLTTEVKSVE 281



 Score = 29.5 bits (63), Expect = 1.6
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 513 NGYTPVLDCHTA 548
           NGY PVLDCHT+
Sbjct: 343 NGYAPVLDCHTS 354


>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
           putative similar to mitochondrial elongation factor Tu
           [Arabidopsis thaliana] gi|1149571|emb|CAA61511
          Length = 454

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +3

Query: 135 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVK 257
           L++A+D  +P P R  DKP  +P++DV+ I G GTV  GR++
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIE 290


>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
           identical to SWISS-PROT:P17745 elongation factor Tu,
           chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
          Length = 476

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +3

Query: 135 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVK 257
           L++A+D  +P P R T+ P  L ++DV+ I G GTV  GRV+
Sbjct: 269 LMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVE 310



 Score = 28.3 bits (60), Expect = 3.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 346 LQEAVPGDNVGFNVKNVSVKELRRGYV 426
           L EA+ GDNVG  ++ +   +++RG V
Sbjct: 343 LDEALAGDNVGLLLRGIQKADIQRGMV 369


>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
           putative similar to EF-1-alpha-related GTP-binding
           protein gi|1009232|gb|AAA79032
          Length = 532

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +3

Query: 15  VAFVPISGWHGDNMLEPSTK--MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 188
           V F+PISG  G NM +   +   PW   W          G    E LD+I  P R  + P
Sbjct: 283 VVFLPISGLMGKNMDQRMGQEICPW---W---------SGPSFFEVLDSIEIPPRDPNGP 330

Query: 189 LRLPLQDVYKIGGIGTVPVGRVK 257
            R+P+ D +K   +GTV +G+V+
Sbjct: 331 FRMPIIDKFK--DMGTVVMGKVE 351



 Score = 27.5 bits (58), Expect = 6.5
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = +1

Query: 340 EALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVL 492
           + ++ A PG+N+   +  +  +++  G+V   S  NP     +F AQ+ +L
Sbjct: 380 DKVKRAGPGENLRVRITGIEDEDILSGFVL-SSIVNPVPAVTEFVAQLQIL 429


>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
           EF-1-alpha, putative contains similarity to
           SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
           [Aeropyrum pernix]
          Length = 667

 Score = 33.9 bits (74), Expect = 0.075
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 126 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTV 239
           G CL++A+D++  P R   KPL +P+ D  +    G V
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQV 484


>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
           domain-containing protein similar to SP|P13905
           Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
           thaliana}; contains Pfam profile PF03143: Elongation
           factor Tu C-terminal domain
          Length = 104

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 513 NGYTPVLDCHTA 548
           NGYTPVLDCHT+
Sbjct: 9   NGYTPVLDCHTS 20


>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
           identical to myb-related transcription factor (CCA1)
           GI:4090569 from [Arabidopsis thaliana]
          Length = 608

 Score = 30.7 bits (66), Expect = 0.70
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 108 KEGKADGKCLIEALDAILPPARPTDKP 188
           KE +A G  + +ALD  +PP RP  KP
Sbjct: 74  KEAEAKGVAMGQALDIAIPPPRPKRKP 100


>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 651

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 241 PSAELNWCVETRYHCCLCPRQHHY*SKVC 327
           P+  L  C   R+HC LC R+ +Y S  C
Sbjct: 66  PNHTLELCSNLRFHCDLCGRRTNYLSYYC 94


>At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family
           protein similar to pantothenate kinase [Emericella
           nidulans] GI:4191500; contains Pfam profiles PF03630:
           Fumble, PF01937: Protein of unknown function
          Length = 901

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 363 RYSFLESFVVLSTDFTSVVMLAGAKTTMVPGFNTP 259
           + S++E FV   T+ T+ V +  +KTT + GF  P
Sbjct: 463 KISWMEKFVRRGTEITAPVPMTPSKTTGLGGFEVP 497


>At3g05990.1 68416.m00684 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to leaf
           senescence-associated receptor-like protein kinase
           [Phaseolus vulgaris] gi|9837280|gb|AAG00510
          Length = 517

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 278 YLV-STHQFNSADGHGTNTTDFVYVLQGKTQGLVSGAGRWQDGIESFNE 135
           Y++ +T+ +   +G GT    F  ++ G   G+V+    + DG+ S+ E
Sbjct: 98  YMIRTTYYYGGVNGKGTPPPVFDQIVDGTLWGIVNTTADYADGLASYYE 146


>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
           1 [Arabidopsis thaliana] Swiss-Prot:Q42525
          Length = 493

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 57  LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 155
           ++  T   W KG++V   EGK    CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221


>At5g19490.1 68418.m02322 repressor protein-related similar to
           repressor protein [Oryza sativa] GI:18481624
          Length = 236

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 238 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 134
           T  +  + +TSC   RRG   GR+ GR  S  S++
Sbjct: 92  TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126


>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
           protein low similarity to 67kD chloroplastic RNA-binding
           protein, P67 [Arabidopsis thaliana] GI:9755842; contains
           Pfam profile PF01535: PPR repeat
          Length = 860

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = +1

Query: 31  FLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 210
           FL+G+ T+       C+ S D     ++ +L + A      PS  LP P    C+ P + 
Sbjct: 18  FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76

Query: 211 YTKSVV 228
            TK VV
Sbjct: 77  -TKPVV 81


>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
           protein low similarity to 67kD chloroplastic RNA-binding
           protein, P67 [Arabidopsis thaliana] GI:9755842; contains
           Pfam profile PF01535: PPR repeat
          Length = 860

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = +1

Query: 31  FLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 210
           FL+G+ T+       C+ S D     ++ +L + A      PS  LP P    C+ P + 
Sbjct: 18  FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76

Query: 211 YTKSVV 228
            TK VV
Sbjct: 77  -TKPVV 81


>At5g10140.1 68418.m01174 MADS-box protein flowering locus F (FLF)
           identical to FLOWERING LOCUS C protein (MADS box protein
           FLOWERING LOCUS F) (Swiss-Prot:Q9S7Q7) [Arabidopsis
           thaliana]
          Length = 196

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +1

Query: 328 GEHHEALQEAVPGDNVGFNVKNVSVKEL 411
           G H+E L E V    VG NVKNVS+  L
Sbjct: 91  GSHYELL-ELVDSKLVGSNVKNVSIDAL 117


>At1g01060.2 68414.m00007 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain;
           identical to cDNA  LATE ELONGATED HYPOCOTYL MYB
           transcription factor GI:3281845
          Length = 645

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 108 KEGKADGKCLIEALDAILPPARPTDKP 188
           KE +  G  + +ALD  +PP RP  KP
Sbjct: 74  KEAEVKGIPVCQALDIEIPPPRPKRKP 100


>At1g01060.1 68414.m00006 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain;
           identical to cDNA  LATE ELONGATED HYPOCOTYL MYB
           transcription factor GI:3281845
          Length = 645

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 108 KEGKADGKCLIEALDAILPPARPTDKP 188
           KE +  G  + +ALD  +PP RP  KP
Sbjct: 74  KEAEVKGIPVCQALDIEIPPPRPKRKP 100


>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
           contains Pfam profile: PF00096 zinc finger, C2H2 type
          Length = 214

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
 Frame = -2

Query: 295 GKDNNGT--WFQHTSLTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRM----ASRASMR 134
           G+D NG      +       G +P PP  YT    RR   S    GG M      RA +R
Sbjct: 20  GEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR 79

Query: 133 HFPSAL 116
             PS L
Sbjct: 80  QIPSWL 85


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,423,851
Number of Sequences: 28952
Number of extensions: 321418
Number of successful extensions: 1052
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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