Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0334
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.36 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.36 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   1.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.8  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 299 KITYVMYLMKLASAW-LKCQR-TPNCTQSCWSHLLC 400
           +I Y  + ++L +     CQ  TPN T + WSH  C
Sbjct: 119 RICYYHFTLELYTVLGAACQVCTPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 299 KITYVMYLMKLASAW-LKCQR-TPNCTQSCWSHLLC 400
           +I Y  + ++L +     CQ  TPN T + WSH  C
Sbjct: 119 RICYYHFTLELYTVLGAACQVCTPNATNTVWSHCQC 154


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 420 GTHCHHPRPSNRQGSGGVPARKSSTRLQ 503
           G H     PS   G+GG+P +  S R Q
Sbjct: 255 GLHATGSAPSPTAGAGGLPPQVPSPRSQ 282


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 550 KFSVSTFNTTSFWIYSCSLVE 488
           K SV TFN    WI  C++ E
Sbjct: 106 KESVDTFNDIFGWIILCNIFE 126


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 325 EARKRLAEVPKDTKLYSELLVTLI 396
           +A K L   PK  K+YS LL+T +
Sbjct: 11  DALKILGIGPKSNKIYSFLLLTTL 34


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 137 PSHRFLRPF 111
           P HRFL PF
Sbjct: 376 PDHRFLEPF 384


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,218
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)