Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0334
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   0.79 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   0.79 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   7.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   7.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   7.4  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 311 VMYLMKLASAWLKCQRTPNCTQSCWSHLLC 400
           V Y   L +A   C  TPN T + WSH  C
Sbjct: 170 VEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 311 VMYLMKLASAWLKCQRTPNCTQSCWSHLLC 400
           V Y   L +A   C  TPN T + WSH  C
Sbjct: 170 VEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 426 HCHHPRPSNRQGSGGVPARKSSTRLQE*IQKDVVLKVDTENFLSP 560
           H  HP  +  QG+G +P+++   + Q+  Q  ++ K  T    SP
Sbjct: 232 HQQHPPGAGVQGAGPIPSQQKHQQHQQQQQSVLLPKHGTARQHSP 276


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 411 PAHGTHCHHPRPSNRQGSGG 470
           P H TH HH    +  G GG
Sbjct: 278 PTHQTHHHHHHHQHGGGVGG 297


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 411 PAHGTHCHHPRPSNRQGSGG 470
           P H TH HH    +  G GG
Sbjct: 278 PTHQTHHHHHHHQHGGGVGG 297


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 411 PAHGTHCHHPRPSNRQGSGG 470
           P H TH HH    +  G GG
Sbjct: 230 PTHQTHHHHHHHQHGGGVGG 249


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,504
Number of Sequences: 2352
Number of extensions: 12849
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)