Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0334
(734 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATP... 73 3e-13
At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putati... 68 7e-12
At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putati... 59 3e-09
At3g25640.1 68416.m03191 expressed protein contains Pfam profile... 30 1.4
At4g35680.1 68417.m05065 expressed protein contains Pfam profile... 29 2.4
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 29 2.4
At5g26680.1 68418.m03171 endonuclease, putative similar to Swiss... 28 5.6
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 28 5.6
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 28 5.6
At5g16850.1 68418.m01974 telomerase reverse transcriptase (TERT)... 28 7.4
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 28 7.4
At5g01840.1 68418.m00103 ovate family protein 59% similar to ova... 28 7.4
At5g58880.1 68418.m07377 hypothetical protein 27 9.8
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 27 9.8
>At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATPase
E subunit / vacuolar proton pump E subunit (VATE)
identical to SP|Q39258 Vacuolar ATP synthase subunit E
(EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump
E subunit) {Arabidopsis thaliana}
Length = 230
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +1
Query: 262 LNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLMEPTVTIR 441
LN +R+KVL+ ++D V + D+A K L V +D Y +LL LIVQ L +L EP+V +R
Sbjct: 74 LNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQCLLRLKEPSVLLR 133
Query: 442 VRQTDKALVESLLGKAQQDYKNRSR 516
R+ D LVE++L A+++Y +++
Sbjct: 134 CREEDLGLVEAVLDDAKEEYAGKAK 158
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 570 GGIELVAARGLIKISNTLESRLELIAQQLLPEIRNA 677
GG+ L + G I NTL++RL++ + LP IR +
Sbjct: 188 GGVVLASRDGKIVCENTLDARLDVAFRMKLPVIRKS 223
>At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 235
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/85 (37%), Positives = 55/85 (64%)
Frame = +1
Query: 262 LNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLMEPTVTIR 441
LN +R+K L+ ++D V + D A K L V D Y +LL +LI+++L +L EP+V +R
Sbjct: 74 LNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIESLLRLKEPSVLLR 133
Query: 442 VRQTDKALVESLLGKAQQDYKNRSR 516
R+ DK +VES++ A++ Y +++
Sbjct: 134 CREMDKKVVESVIEDAKRQYAEKAK 158
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 558 PDTCGGIELVAARGLIKISNTLESRLELIAQQLLPEIR 671
P GG+ L + G I NTL++RL++ +Q LP+IR
Sbjct: 186 PHCSGGVVLASQDGKIVCENTLDARLDVAFRQKLPQIR 223
Score = 34.3 bits (75), Expect = 0.085
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 44 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKI 196
++DADV KQI+ M+ FI Q FNIE+ +L++ + K+
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKL 51
>At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 237
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = +1
Query: 262 LNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKL------YSELLVTLIVQALFQLME 423
LN +R+KVL+ ++D V + +EA K+L +V + Y LL LIVQ L +L E
Sbjct: 74 LNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLLKDLIVQCLLRLKE 133
Query: 424 PTVTIRVRQTDKALVESLLGKAQQDYKNRSR 516
P V +R R+ D +VES+L A ++Y +++
Sbjct: 134 PAVLLRCREEDLDIVESMLDDASEEYCKKAK 164
Score = 34.3 bits (75), Expect = 0.085
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 570 GGIELVAARGLIKISNTLESRLELIAQQLLPEIRNA 677
GG+ L + G I NTL++RLE+ + LPEIR +
Sbjct: 194 GGVVLASRDGKIVCENTLDARLEVAFRNKLPEIRKS 229
>At3g25640.1 68416.m03191 expressed protein contains Pfam profile
PF04759: Protein of unknown function, DUF617
Length = 267
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 388 TLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYKNRSRRTLC*KSTLRTFC 555
T + L QL PT ++ VR+ LV L A YK S++ L +ST RT+C
Sbjct: 119 TRLPAVLIQLPTPT-SVLVREMASGLVRIALETAA--YKTDSKKKLLEESTWRTYC 171
>At4g35680.1 68417.m05065 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 503
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = -3
Query: 585 PARYHHRCRATKSSQCRLSTQRPSGSILVVLLSFSEQGLHQSLVGLTDADGDSGFHELEE 406
P+R H +++ RLS R S S + V SF + + LV LT+ G HEL E
Sbjct: 24 PSRIHPLSVKLRTALSRLSIWRRSSSSISVSASFGYETVLVGLVNLTELYG--CVHELLE 81
Query: 405 SLHNK 391
S + K
Sbjct: 82 SPYVK 86
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 354 KGHQTVLRAAGHTYC-AGSLPAHGTHCHHPRPSNRQGSGGVPAR 482
+GH+ V + +C G+ G+ C +P G+G PAR
Sbjct: 1613 RGHRVVYSRSSRFFCDCGAGGVRGSSCQCLKPRKYNGNGSAPAR 1656
>At5g26680.1 68418.m03171 endonuclease, putative similar to
Swiss-Prot:P39748 FLAP endonuclease-1 (Maturation factor
1) (MF1) [Homo sapiens]
Length = 453
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 644 DQLQARLQSVADLDKSPGCNQLDTTTGVGRQKVLSVDFQH 525
++LQ + DL GC+ D+ G+G Q L + QH
Sbjct: 215 EELQLTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIRQH 254
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 358 PLALQPGACELHQVHYVRDLHALSVPSDELGSAC 257
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 323 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 356
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 358 PLALQPGACELHQVHYVRDLHALSVPSDELGSAC 257
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 362 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 395
>At5g16850.1 68418.m01974 telomerase reverse transcriptase (TERT)
identical to telomerase reverse transcriptase
[Arabidopsis thaliana] GI:5880683
Length = 1123
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = -2
Query: 697 VRVASEEALRISGSSCWAISSKRDSRVLLILISPLAATS--SIPPQVSGDKKFSVSTFNT 524
+++ EE + + + + K++SR ++LI +A S S+ Q+S + +++ N+
Sbjct: 1056 LKLYKEEVIWLGLDAYIQVLKKKNSRYRMLLIYLKSALSKHSLSQQLSSELRYATDRSNS 1115
Query: 523 TSFW 512
+S W
Sbjct: 1116 SSLW 1119
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 277 LKVLKVREDHVRNVLDEARKRLAEV 351
LK +KV+ED N+LDE ++ L+EV
Sbjct: 54 LKRIKVQEDRGLNLLDEVQQWLSEV 78
>At5g01840.1 68418.m00103 ovate family protein 59% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 270
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 455 TRLWWSPCSEKLNKTTRIDP 514
T W SPCS KL+KT P
Sbjct: 127 TGSWHSPCSSKLSKTATFTP 146
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Frame = +1
Query: 259 MLNQARLKVLKVREDHVRNVLD----EARKRLAEVPKDTKLYSELLVTLIVQ-----ALF 411
++ A K + V E+ NVL+ A +L ++ S ++ L VQ L
Sbjct: 794 LVKSADEKAMLVEEEKTHNVLEASSSNAHTQLVDLDYGNAENSSDVILLQVQDSHKSPLD 853
Query: 412 QLMEPTVTIRVRQTDKALVESLLGKAQQDYKNRSRRTLC 528
+ ++ ++ V +T+ L++ G++ Q+YKNR C
Sbjct: 854 ESVDQEISKEVEKTE--LLKDFCGESTQEYKNRGNVEAC 890
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 253 LNMLNQARLKV-LKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALFQLMEPT 429
+N + A L+V LKV+E+ + V+DE RK A V +L E L E
Sbjct: 96 MNEKHCADLEVNLKVKEEELNMVIDELRKNFASV--QVQLAKEQTEKLAANESLG-KERE 152
Query: 430 VTIRVRQTDKALVESLLGKAQQDYKNRSRR 519
I V A+ E L K Q + + ++R
Sbjct: 153 ARIAVESLQAAITEE-LAKTQGELQTANQR 181
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,115,904
Number of Sequences: 28952
Number of extensions: 276441
Number of successful extensions: 816
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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