Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0326
(630 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 75 5e-14
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 75 5e-14
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 75 5e-14
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 73 2e-13
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 73 2e-13
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 71 8e-13
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 40 0.001
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 27 7.8
At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1 (... 27 7.8
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 7.8
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 74.5 bits (175), Expect = 5e-14
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +3
Query: 255 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-*TMVCL 431
KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L + V L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 119
Query: 432 YV*IRLL*IC-YVSPSLTLLGDTPT*RCP*VYKRGFAKLSGQRIPITSNSIVERGSINTT 608
V + + V P +T +YKRGF KL+ QR +T NSIV++G
Sbjct: 120 KVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHG 179
Query: 609 FICVE 623
ICVE
Sbjct: 180 IICVE 184
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 374 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 508
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLK
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 85 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYR 252
+++ VPESVLK Q + +K++ IF RA+QY KEY+
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 74.5 bits (175), Expect = 5e-14
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +3
Query: 255 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-*TMVCL 431
KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L + V L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 119
Query: 432 YV*IRLL*IC-YVSPSLTLLGDTPT*RCP*VYKRGFAKLSGQRIPITSNSIVERGSINTT 608
V + + V P +T +YKRGF KL+ QR +T NSIV++G
Sbjct: 120 KVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHG 179
Query: 609 FICVE 623
ICVE
Sbjct: 180 IICVE 184
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 374 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 508
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLK
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 85 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYR 252
+++ VPESVLK Q + +K++ IF RA+QY KEY+
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 74.5 bits (175), Expect = 5e-14
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +3
Query: 255 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-*TMVCL 431
KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L + V L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 119
Query: 432 YV*IRLL*IC-YVSPSLTLLGDTPT*RCP*VYKRGFAKLSGQRIPITSNSIVERGSINTT 608
V + + V P +T +YKRGF KL+ QR +T NSIV++G
Sbjct: 120 KVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHG 179
Query: 609 FICVE 623
ICVE
Sbjct: 180 IICVE 184
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = +2
Query: 374 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 508
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLK
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 85 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYR 252
+++ VPESVLK Q + +K++ IF RA+QY KEY+
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 58
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +2
Query: 374 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 508
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLK
Sbjct: 103 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLK 147
Score = 70.9 bits (166), Expect = 6e-13
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Frame = +3
Query: 255 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-*TMVCL 431
K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L + V L
Sbjct: 63 KDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 122
Query: 432 YV*IRLL*IC-YVSPSLTLLGDTPT*RCP*VYKRGFAKLSGQRIPITSNSIVERGSINTT 608
V + + V P +T +YKRG+ KL+ QRI +T NSIV++
Sbjct: 123 KVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHG 182
Query: 609 FICVE 623
ICVE
Sbjct: 183 IICVE 187
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 106 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 249
VPESVLK + + +++ ++ IFKRAEQY KEY
Sbjct: 13 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEY 60
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +2
Query: 374 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 508
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLK
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLK 142
Score = 70.9 bits (166), Expect = 6e-13
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Frame = +3
Query: 255 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-*TMVCL 431
K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L + V L
Sbjct: 58 KDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 117
Query: 432 YV*IRLL*IC-YVSPSLTLLGDTPT*RCP*VYKRGFAKLSGQRIPITSNSIVERGSINTT 608
V + + V P +T +YKRG+ KL+ QRI +T NSIV++
Sbjct: 118 KVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHG 177
Query: 609 FICVE 623
ICVE
Sbjct: 178 IICVE 182
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 106 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 249
VPESVLK + + +++ ++ IFKRAEQY KEY
Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEY 55
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 70.5 bits (165), Expect = 8e-13
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Frame = +3
Query: 255 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-*TMVCL 431
KE++ I L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L + V L
Sbjct: 58 KEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 117
Query: 432 YV*IRLL*IC-YVSPSLTLLGDTPT*RCP*VYKRGFAKLSGQRIPITSNSIVERGSINTT 608
V + + V P +T +YKRG+ KL+ QRI +T NSIVE+
Sbjct: 118 KVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHG 177
Query: 609 FICVE 623
IC E
Sbjct: 178 IICTE 182
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +2
Query: 374 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 508
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G+PNLK
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLK 142
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 106 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 249
VPESVLK Q + + ++ IFKRAEQY KEY
Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEY 55
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +3
Query: 255 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDC-AK*TMVCL 431
KE D IR+ ++ + + P ++ L F+IRI+G N + PK+ + N L + T V
Sbjct: 62 KEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFA 121
Query: 432 YV*IRLL-*ICYVSPSLTLLGDTPT*RCP*VYKRGFAKLSGQRIPITSNSIVER 590
L + V P +T +YK+G + G +P+T N+I+E+
Sbjct: 122 KATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQ 175
Score = 35.1 bits (77), Expect = 0.039
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 374 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLK 508
+ +++L +L+ + GVF + + L +PY+ +GYPN K
Sbjct: 102 KTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDK 146
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 79 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIR 258
+E++K L +PE VLK + S KKK KR E +V E+R +
Sbjct: 3 EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAK 62
Query: 259 NV 264
V
Sbjct: 63 EV 64
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 329 IGICHPNPWYQPSFTEVRKVL 391
+ CHPNP +PS V KVL
Sbjct: 586 LACCHPNPNQRPSMKTVLKVL 606
>At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1
(MTHFR1) identical to methylenetetrahydrofolate
reductase MTHFR1 [Arabidopsis thaliana] GI:5911425
Length = 592
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 329 IGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN-KATVNMLRIAEPYIAWGYP 499
IG +PW + + + +L +IN+ F+ +N + +VN + P I WG P
Sbjct: 403 IGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGP 460
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 406 QSKQLQNFTDF-GETWLIPRIRMTNANLASPGT 311
+ KQL+ + G TW+ P I +N ++ SPGT
Sbjct: 126 ERKQLRTHLIWTGGTWIQPEIEESNKSMFSPGT 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,822,202
Number of Sequences: 28952
Number of extensions: 262998
Number of successful extensions: 691
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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