Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0325
         (757 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5TUH8 Cluster: Putative uncharacterized protein; n=1; ...    38   0.35 
UniRef50_Q9XMS2 Cluster: Orf1386; n=2; Alveolata|Rep: Orf1386 - ...    36   1.1  
UniRef50_Q64Q37 Cluster: Putative O-antigen polymerase; n=1; Bac...    34   4.4  
UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    34   4.4  
UniRef50_Q5CGT0 Cluster: Peptidase, M16 family; n=2; Cryptospori...    33   5.8  
UniRef50_Q4DP60 Cluster: Putative uncharacterized protein; n=2; ...    33   5.8  
UniRef50_A2DHB3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_A5TUH8 Cluster: Putative uncharacterized protein; n=1;
           Fusobacterium nucleatum subsp. polymorphum ATCC
           10953|Rep: Putative uncharacterized protein -
           Fusobacterium nucleatum subsp. polymorphum ATCC 10953
          Length = 226

 Score = 37.5 bits (83), Expect = 0.35
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -2

Query: 237 IKALVYP*LKKSDVYIGITHTKYHNVISIFLKRKAFYYVSEAHIKIYYCNTDKTL--TES 64
           +K L Y  +  S ++IG+     +N       RK F  VS   IKIYY N +K +  T++
Sbjct: 104 LKELTYKHIFYSIIFIGVIIFNCYNFFRELKSRKYFLTVSGKTIKIYYENNEKEIITTDN 163

Query: 63  MTCVRIY 43
           ++ VR Y
Sbjct: 164 ISQVRFY 170


>UniRef50_Q9XMS2 Cluster: Orf1386; n=2; Alveolata|Rep: Orf1386 -
           Tetrahymena pyriformis
          Length = 1386

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
 Frame = -2

Query: 273 FHGSFY*IQYRHIKALVYP*LKKSDVYIGITHTKYHNVISIFLKRKAFYYVSEAHIKIYY 94
           +  S Y I+Y  +  L Y  L    +YIG   +KYH    I  K  +   V E  IKI  
Sbjct: 471 YDNSIYIIKY--LDGLEYAMLTHKKLYIGRNISKYHKKKYIVKKIPS---VLEKEIKIGK 525

Query: 93  CNTDKTLTES-MTCVRIYNNYSRHITTINL 7
            N +K L    +  +  YNNY ++I  IN+
Sbjct: 526 SNLNKYLEHKYIYYITKYNNYMQYIKLINV 555


>UniRef50_Q64Q37 Cluster: Putative O-antigen polymerase; n=1;
           Bacteroides fragilis|Rep: Putative O-antigen polymerase
           - Bacteroides fragilis
          Length = 359

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +2

Query: 296 IFEERTLIHFSFQGTCYIIFYISLDENLSFFNYYYYCVFNHFFYLNSNNIKLE**IRMYL 475
           +F   TL  F+  G         +D +  FF       F  FF+L S+++++   I  Y 
Sbjct: 245 LFSVSTLRRFALYGVVLYFTRNKIDTSTYFFKNCMVVSF-FFFFLFSSSLEMAYRISYYF 303

Query: 476 H*LSDVLKVYCL-CIQHVVF 532
                VL  YC+ CI HV F
Sbjct: 304 FVFEIVLVPYCITCIHHVKF 323


>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 716  DVDDYRIIRKNKIILRFIASFYKDDFQFYNCRYC-F*NYI*QH*-KTDYLCGEIFTKNSF 543
            D++ Y  I  N  I  +I      D+ FYN +Y  F NY+ Q   + +Y       KNS+
Sbjct: 4003 DINIYTNIPNNININPYIYGMNFYDYNFYNEKYKNFQNYLGQEINENEYNANNNTHKNSY 4062

Query: 542  FNPKIQHAVYKDNILLK 492
            F+    +  YKD+I  K
Sbjct: 4063 FSSNENYNKYKDDIFNK 4079


>UniRef50_Q5CGT0 Cluster: Peptidase, M16 family; n=2;
           Cryptosporidium|Rep: Peptidase, M16 family -
           Cryptosporidium hominis
          Length = 1254

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 302 EERTLIHFSFQGTCYIIFYISLDENLSFFNYYYYCVFNHFFY 427
           E+  ++ F FQ T Y +    L+EN SF   Y++     FFY
Sbjct: 730 EKLAILMFLFQNTLYDVLPSHLNENFSFERSYHHWELQEFFY 771


>UniRef50_Q4DP60 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 665

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +2

Query: 329 FQGTCYIIFYISLDENLSFFNYYYYCVFNHFFYLN 433
           F+  C+++F+    ++  FFNYYYY    +FF+L+
Sbjct: 137 FRCCCFVLFFPPFFKSFLFFNYYYY----YFFFLH 167


>UniRef50_A2DHB3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 372

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -2

Query: 198 VYIGIT-HTKYHNVISIFLKRKAFYYV--SEAHIKIYYCNTDKTLTES 64
           VY G T   +Y N+ S++  R+ FYYV  +E  ++ YY  T+   T+S
Sbjct: 92  VYYGHTIPMEYENMASVYRFRRKFYYVPSTETKLQFYYSPTNNLSTKS 139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,320,907
Number of Sequences: 1657284
Number of extensions: 11243773
Number of successful extensions: 32154
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31939
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)