Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0324
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 171 3e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 171 3e-43
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 171 4e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 171 4e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 171 4e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 171 4e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 171 4e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 171 4e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 171 4e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 164 4e-41
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 133 9e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 111 3e-25
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 90 1e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 88 5e-18
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical pr... 35 0.045
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.42
AF003148-8|AAB54211.2| 346|Caenorhabditis elegans Hypothetical ... 28 6.8
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 27 9.0
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 27 9.0
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 27 9.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 171 bits (417), Expect = 3e-43
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 168 bits (409), Expect = 3e-42
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (417), Expect = 3e-43
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 168 bits (409), Expect = 3e-42
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 167 bits (407), Expect = 5e-42
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 167 bits (407), Expect = 5e-42
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 168 bits (409), Expect = 3e-42
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 167 bits (407), Expect = 5e-42
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 167 bits (407), Expect = 5e-42
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEA+FQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 55 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 114
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 115 GVTHTVPIYEGYALPHAILRLDLA 138
Score = 168 bits (409), Expect = 3e-42
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 137 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 196
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 197 YELPDGQVITVGNERFRCPEALFQPSF 223
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 221 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 272
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 249 DLYANTVLSGGTTMYPGIADRMQKEITA 276
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 144
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 145 GVTHTVPIYEGYALPHAILRLDLA 168
Score = 168 bits (409), Expect = 3e-42
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 167 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 226
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 227 YELPDGQVITVGNERFRCPEALFQPSF 253
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 251 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 302
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 279 DLYANTVLSGGTTMYPGIADRMQKEITA 306
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 171 bits (416), Expect = 4e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPKANREKMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAILRLDLA
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLA 182
Score = 168 bits (409), Expect = 3e-42
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD QEMATAA+S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSF 267
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
P+FL GMES GIHET YNSIMKCD+DIRK T MYPGIADR ++
Sbjct: 265 PSFL-GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 DLYANTVMSGGTHV-PRYRRQMQKEITA 661
DLYANTV+SGGT + P +MQKEITA
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITA 320
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 164 bits (399), Expect = 4e-41
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLTEAPLNPK+NREKMTQIMF TFN+PAMYV IQAVLSLYASGRTTGIVLD+GD
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGD 157
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+HTVPIYEGYALPHAI RLDLA
Sbjct: 158 GVTHTVPIYEGYALPHAIQRLDLA 181
Score = 156 bits (378), Expect = 2e-38
Identities = 73/87 (83%), Positives = 79/87 (90%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA D E+A AA+S+SLEKS
Sbjct: 180 LAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKS 239
Query: 427 YELPDGQVITIGNERFRCPEALFQPSF 507
YELPDGQVITIGNERFRCPE LFQP+F
Sbjct: 240 YELPDGQVITIGNERFRCPEVLFQPAF 266
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +3
Query: 495 PAFLPGMESCGIHETVYNSIMKCDVDIRKTC-TPTPSCPVVHMYPGIADRCRR 650
PAF+ GME GIHET Y SIMKCDVDIRK T M+PGIADR ++
Sbjct: 264 PAFI-GMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQK 315
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 133 bits (322), Expect = 9e-32
Identities = 59/84 (70%), Positives = 72/84 (85%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
PEEHPVLLT+APLNP NRE+ +I F TFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGD
Sbjct: 102 PEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGD 161
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+H VPI +G+A+ HAI R+DLA
Sbjct: 162 GVTHAVPIVKGFAMKHAIQRMDLA 185
Score = 74.5 bits (175), Expect = 6e-14
Identities = 39/85 (45%), Positives = 50/85 (58%)
Frame = +1
Query: 247 LGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKS 426
L RD+T+YL +L GY F + E EIVR++KE CY+ALD T + S++ S
Sbjct: 184 LAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSS 238
Query: 427 YELPDGQVITIGNERFRCPEALFQP 501
Y LPD I I N FR PE LF+P
Sbjct: 239 YALPDTTKIEISNSLFRAPEVLFKP 263
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 504 LPGMESCGIHETVYNSIMKCDVDIRKT 584
L G E G+ V SIMKCDVD+R+T
Sbjct: 265 LIGTEWPGMAHVVNQSIMKCDVDLRQT 291
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 111 bits (268), Expect = 3e-25
Identities = 50/84 (59%), Positives = 65/84 (77%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
P+E +LLTE PLNP +NREKM Q+MF + ++YVA+QAVL+LYA G TG+V+DSGD
Sbjct: 102 PKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGD 161
Query: 182 GVSHTVPIYEGYALPHAILRLDLA 253
GV+H P+YEG+AL H RLD+A
Sbjct: 162 GVTHICPVYEGFALHHLTRRLDIA 185
Score = 100 bits (240), Expect = 8e-22
Identities = 45/82 (54%), Positives = 59/82 (71%)
Frame = +1
Query: 256 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAASTSLEKSYEL 435
RD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D+ QE A +T L + Y L
Sbjct: 187 RDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTL 246
Query: 436 PDGQVITIGNERFRCPEALFQP 501
PDG+VI +G ERF PE LFQP
Sbjct: 247 PDGRVIRLGGERFEAPEILFQP 268
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
P EHPVL +E+ N +A REK+T+IMF F PA Y++ VLS +A GRT G+++DSG
Sbjct: 121 PSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGA 180
Query: 182 GVSHTVPIYEGYALPHAILR 241
+ VP+++GYA+ HA+++
Sbjct: 181 TQTSVVPVFDGYAVTHAVVK 200
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.2 bits (209), Expect = 5e-18
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRT--------T 157
PE+H LLTE PLN NRE +IMF +FN P +Y+A+QAVL+L AS + T
Sbjct: 112 PEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLT 171
Query: 158 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 253
G+V+DSGDGV+H +P+ +GY + I + +A
Sbjct: 172 GLVIDSGDGVTHCIPVADGYVIGSCIKHIPIA 203
Score = 44.8 bits (101), Expect = 6e-05
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Frame = +1
Query: 220 SAPRHPPSGLGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATA 399
S +H P + RD+T ++ +L +R ++ E+ + IKEK CYV D+ +E
Sbjct: 195 SCIKHIP--IAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEF--V 250
Query: 400 AASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQPSF 507
T K DG IT +G ERF PE F P F
Sbjct: 251 KYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEF 294
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +2
Query: 2 PEEHPVLLTEAPLNPKANREKMTQIMFXTFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 181
P ++ VLL+ P ++ QI + + Q L LYA TTG+V+D G+
Sbjct: 271 PWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGE 330
Query: 182 GVSHTVPIYEGYALPHAI 235
V + VP+ +GY + AI
Sbjct: 331 RV-NIVPVIDGYVVESAI 347
Score = 34.3 bits (75), Expect = 0.078
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 301 YSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAAST--SLEKSYELPDGQV-ITIGNER 471
Y+F + E+ I+R E+ YV D +E + T SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 472 FRCPEALFQP 501
F C E LF+P
Sbjct: 433 FLCTEGLFKP 442
Score = 30.3 bits (65), Expect = 1.3
Identities = 8/25 (32%), Positives = 20/25 (80%)
Frame = +3
Query: 510 GMESCGIHETVYNSIMKCDVDIRKT 584
G+++ G+H+ ++ +I++C +D R+T
Sbjct: 446 GLDTKGLHQLIHEAILQCPIDSRRT 470
>Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical
protein T23G5.1 protein.
Length = 788
Score = 35.1 bits (77), Expect = 0.045
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +1
Query: 229 RHPPSGLGCRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDLXQEMATAAAS 408
RH P GLG + L D M + Y FT+ R++ + I E + Y AL+ E+A
Sbjct: 503 RHRPIGLGVQGLADCFMLM----RYPFTSAEARDLNKRIFETIYYAALEASCELAELNGP 558
Query: 409 TSLEKSYELPDGQV 450
S + + GQ+
Sbjct: 559 YSTYEGSPVSKGQL 572
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 186 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 91
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF003148-8|AAB54211.2| 346|Caenorhabditis elegans Hypothetical
protein F32B5.3 protein.
Length = 346
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 177 EMVSPT-PYPSTKVTLCPTPSSVWTWLSRLDRLPHED 284
E++ PT P P+ K+T PT +V++ R+ +LP D
Sbjct: 71 EIIRPTYPVPTLKMTHEPTCDNVFSEWKRIFKLPQPD 107
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 486 GSLPAFLPGMESCGIH---ETVYNSIMKCDVDIRKTCTPTPSCPVVHMYP 626
GSL F ++SC H E VY +I CD I+ T VVH +P
Sbjct: 96 GSLD-FGSTLDSCHYHHYGEKVYAAISNCDGRIKGTVIDDGEIIVVHPFP 144
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 486 GSLPAFLPGMESCGIH---ETVYNSIMKCDVDIRKTCTPTPSCPVVHMYP 626
GSL F ++SC H E VY +I CD I+ T VVH +P
Sbjct: 96 GSLD-FGSTLDSCHYHHYGEKVYAAISNCDGRIKGTVIDDGEIIVVHPFP 144
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 486 GSLPAFLPGMESCGIH---ETVYNSIMKCDVDIRKTCTPTPSCPVVHMYP 626
GSL F ++SC H E VY +I CD I+ T VVH +P
Sbjct: 96 GSLD-FGSTLDSCHYHHYGEKVYAAISNCDGRIKGTVIDDGEIIVVHPFP 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,571,250
Number of Sequences: 27780
Number of extensions: 265772
Number of successful extensions: 899
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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