Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0323
         (402 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    23   1.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   3.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   5.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   5.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   6.9  

>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 131 EESIYVRLQS*CQELRVLKLRAFVLRLECML 223
           E  +Y+R +  CQE R+ K     +R ECM+
Sbjct: 27  EIDMYMRRK--CQECRLKKCLTVGMRPECMV 55


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 185 SAPEAPGINSAILRKLIPRVRFI 117
           SA   PG+NS    K  P ++ +
Sbjct: 68  SAGSIPGVNSTSENKTFPTIKIV 90


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 185 SAPEAPGINSAILRKLIPRVRFI 117
           SA   PG+NS    K  P ++ +
Sbjct: 68  SAGSIPGVNSTSENKTFPTIKIV 90


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 78   GGPFGHPQNSLEKNESDSRN 137
            G P GHP N+   + S S++
Sbjct: 1760 GPPVGHPTNASAHSRSGSQS 1779


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +1

Query: 100 KIHSRKMNLTRGINLRKIAE-LMPGASGAEVKG 195
           +I   K++  +GINLR++ E ++  A   ++KG
Sbjct: 282 EIQCVKISALKGINLRELTEAIIVQAELMDLKG 314


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 131 EESIYVRLQS*CQELRVLKLRAFVLRLECML 223
           E  +Y+R +  CQE R+ K     +R EC++
Sbjct: 230 EIDMYMRRK--CQECRLKKCLTVGMRPECVV 258


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 22  ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNL 126
           AL  P      +  PPP +   + ++K H    NL
Sbjct: 890 ALAEPYNQRGTVVSPPPTKRRTMKVVKYHLFLTNL 924


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 22   ALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNL 126
            AL  P      +  PPP +   + ++K H    NL
Sbjct: 928  ALAEPYNQRGTVVSPPPTKRRTMKVVKYHLFLTNL 962


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 196 VCTEAGMYALRERRVHVTQETLKW 267
           VC     Y+LR+ + ++ Q   +W
Sbjct: 15  VCQAKAHYSLRDFKANIFQVKYQW 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,193
Number of Sequences: 438
Number of extensions: 2178
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)