Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0322
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 24 1.6
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.8
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 5.0
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 5.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 5.0
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 5.0
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 5.0
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 5.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.7
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 398 WAEVDGMCYSYDAHILVVILLREFGMV-NSKVNIRYFTG 285
W + G C S HI++V L EFG++ + K++ ++ G
Sbjct: 46 WFKAIGTCGS---HIIIVGLFYEFGLITHVKLSSDWYMG 81
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 424 WIIAPCWMFGPKWMACVTRTMLTSL 350
W+I PC F W C+ ++ +L
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANL 103
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 424 WIIAPCWMFGPKWMACVTRTMLTSL 350
W+I PC F W C+ ++ +L
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANL 103
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 424 WIIAPCWMFGPKWMACVTRTMLTSL 350
W+I PC F W C+ ++ +L
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANL 103
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 371 SNTCHPLRPKHPAGCYYPTRCRNTPGYF 454
S++C + Y T CR PGYF
Sbjct: 276 SHSCEACPAHSKSSDYGFTECRCDPGYF 303
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 193 YHYLSTATCFHGEFYD-PAYRRLSLDLPVAVSPVKYLMFTLLLTIPN 330
+ +LS+ + + Y+ P Y +++LD V P+ M+ TIPN
Sbjct: 621 FFFLSSMDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPN 667
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.2 bits (45), Expect = 5.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 193 YHYLSTATCFHGEFYD-PAYRRLSLDLPVAVSPVKYLMFTLLLTIPN 330
+ +LS+ + + Y+ P Y +++LD V P+ M+ TIPN
Sbjct: 621 FFFLSSMDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPN 667
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 209 LLPVSMENSTILHTVDYRWIFPS 277
LLP S EN ++ D IFP+
Sbjct: 344 LLPYSPENQAVVARHDEAMIFPA 366
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -3
Query: 608 RRRICYQSRRDHDPCTVPCSFLCWSQ*VRACGGSVRYTAALN 483
RRR+ QS R + CW+ + GG+ + A +
Sbjct: 237 RRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFS 278
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -3
Query: 608 RRRICYQSRRDHDPCTVPCSFLCWSQ*VRACGGSVRYTAALN 483
RRR+ QS R + CW+ + GG+ + A +
Sbjct: 237 RRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFS 278
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 208 LKGSGSW*EQYQRTVGTIDSR 146
+K SG W +Y R + D R
Sbjct: 288 VKNSGQWLREYDRELEDFDGR 308
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/72 (19%), Positives = 28/72 (38%)
Frame = -1
Query: 568 LVLFPAVFFVGHNEFELVEVPSDTLPP*TVVPHPSRSTKIPWGITTPCWIIAPCWMFGPK 389
+V+F V F+ H + + V + + P + +PS ++P C + G
Sbjct: 384 IVIFSVVGFMAHEQQKPVADVAASGPGLAFLVYPSAVLELPGSSIWSCLFFFMLILIGLD 443
Query: 388 WMACVTRTMLTS 353
C +T+
Sbjct: 444 SQFCTVEGFITA 455
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,623
Number of Sequences: 438
Number of extensions: 5159
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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