Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0318
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 48 5e-06
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 48 1e-05
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 46 2e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 45 7e-05
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 42 4e-04
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 42 4e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 42 6e-04
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 40 0.003
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 36 0.024
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.031
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 33 0.17
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.17
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.22
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.22
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 33 0.29
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.6
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 30 2.1
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.7
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 29 3.6
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.8
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1) 28 6.3
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.3
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/86 (36%), Positives = 43/86 (50%)
Frame = -2
Query: 582 PASDHSATVHGRFR*QLREELKHLQNGAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVA 403
P DH G L EE GAG C GDSGGPL+ G L G++S+VA
Sbjct: 88 PLVDHVTCKRGLKEFYLDEETMMCVGGAGS-SACNGDSGGPLVCEEGGKWVLRGVASWVA 146
Query: 402 QNRCQDGFPSAFARVTSFNNFIRQHL 325
++C S +ARV+S ++I+ +
Sbjct: 147 TSQCPVNNYSVYARVSSDVDWIQDKI 172
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARV 358
G G IC GDSGGPL NG L G++S+VA+ C + S +ARV
Sbjct: 137 GGAGSSICHGDSGGPLQCEENGHWVLRGVASWVARMHCPGEYYSVYARV 185
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQH 328
G G C GDSGGPL N L G++S+V C S +ARV+S++N+I +
Sbjct: 462 GGAGSSACNGDSGGPLQCLENERWVLRGVASWVTAETCPGNTFSVYARVSSYSNWIESN 520
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = -2
Query: 489 GICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQD-GFPSAFARVTSFNNFIRQ 331
G C+GDSGGPL+ G L+G++S+ + N C D G+ +A V F ++IRQ
Sbjct: 1968 GTCKGDSGGPLVCESKGRWVLMGVTSW-SYNGCADSGYAGVYADVVYFKDWIRQ 2020
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = -2
Query: 495 GVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQHL*T 319
G+ C+GDSGGPL+ N TL+G++S+ +P +A++T +++ H+ T
Sbjct: 395 GIDTCQGDSGGPLVCENNNKWTLVGVTSW-GYGCAHPDYPGIYAKLTELKDWVFHHMAT 452
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = -2
Query: 489 GICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
G C+GDSGGPL+ RNG TL G+ SF A N C+ + + +V+++ ++I
Sbjct: 125 GACQGDSGGPLVCERNGQWTLYGVVSFGAGN-CEVTSYTVYTKVSNYLDWI 174
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = -2
Query: 663 MGGRCWIWIN**RANWYLGKSGDEPSE-------PASDHSATVHGRFR*QLREELKHLQN 505
+G +C+I W G +PSE P + HSA EE +
Sbjct: 193 VGAQCFI------TGWGRLVGGGQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICA 246
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
G G+G C+GDSGGP + N G L G S+ Q C + FARV+SF ++I
Sbjct: 247 GGMGMGGCQGDSGGPFVCNEGGRWVLRGAVSW-GQPMCGTDHYTVFARVSSFIDWI 301
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = -2
Query: 543 R*QLREELKHLQNGAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFA 364
R + RE+ + + AGG C GDSGGPL+ NG L G S+ +N C + FA
Sbjct: 266 RRKFREKREARSDAAGG---CNGDSGGPLVCEDNGSWFLHGAVSYGLRN-CPTTHYTVFA 321
Query: 363 RVTSFNNFIRQ 331
RV S+ ++I++
Sbjct: 322 RVASYTDWIKR 332
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = -2
Query: 489 GICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQ 331
G C GDSGGPL+ NG L G S+ +N C + FARV S+ ++I++
Sbjct: 615 GGCNGDSGGPLVCEDNGSWFLHGAVSYGLRN-CPTTHYTVFARVASYTDWIKR 666
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -2
Query: 501 AGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQ 331
+G G C GDSGGPL+ NG L G S+ + C + + FARV S+ ++I+Q
Sbjct: 256 SGASGGCNGDSGGPLVCEDNGRWYLHGAVSY-GKLHCPTTYYTVFARVASYTDWIKQ 311
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 507 NGAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
N C+GDSGGPL+ G L G +SF C S + RV S+ +I
Sbjct: 496 NTENAASSCQGDSGGPLVCEEEGRWVLHGATSF--GKSCSPKHYSVYTRVNSYMKWI 550
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
G G G C+GDSGGPL+ N G L GI S+ C F + F RV ++ +I
Sbjct: 579 GGPGRGGCQGDSGGPLVCNEAGRWVLRGIVSW-GSRECSTEFYTVFTRVINYMPWI 633
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
G G G C+GDSGGPL+ N G L GI S+ C F + F RV ++ +I
Sbjct: 119 GGPGRGGCQGDSGGPLVCNEAGRWVLRGIVSW-GSRECSTEFYTVFTRVINYMPWI 173
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSF 349
G G C GDSGGPL+ ++GV L G S+ A+ C + + F RV+S+
Sbjct: 669 GAAGGCNGDSGGPLVCEQSGVWVLHGAVSYGAR-WCPTDYYTVFTRVSSY 717
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -2
Query: 489 GICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQ 331
G C GDSGGPL+ NG L G S+ C + FARV S+ ++I++
Sbjct: 945 GGCNGDSGGPLVCEDNGSWFLHGAVSY-GMKYCPTTHYTVFARVASYTDWIKR 996
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQ 331
G G C GDSGGPL+ + G L G S+ + C A+AR++S ++I +
Sbjct: 487 GGSGSSACSGDSGGPLVCHEGGTWVLRGAVSWGTSHSCPGRMFVAYARISSHIDWIER 544
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 567 SATVHGRFR*QLREELKHLQNGAGGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
SA+ R +L E + +GG+ C+GDSGGP++ NG L G+ S+
Sbjct: 24 SASTCSRAYSRLHESMVCAGRASGGIDSCQGDSGGPMVCEYNGKFNLEGVVSW 76
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -2
Query: 504 GAGGVG--ICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQ 331
G GV +C GDSGGPL+ R G L+G+SS+ C P F+ V + ++IR+
Sbjct: 471 GTEGVAKAVCSGDSGGPLVCERGGRWFLMGLSSWGWV--CPQARPKVFSDVLAAMDWIRE 528
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -2
Query: 504 GAGGVG--ICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQ 331
G GV +C GDSGGPL+ R G L+G+SS+ C P F+ V + ++IR+
Sbjct: 720 GTEGVAKAVCSGDSGGPLVCERGGRWFLMGLSSWGWV--CPQARPKVFSDVLAAMDWIRE 777
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
GAGG+ C+GDSGGPL+ V L+G S+
Sbjct: 286 GAGGIDACQGDSGGPLVCKEGDVWYLMGAISW 317
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -2
Query: 510 QNGAGGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFAR 361
Q AGG C+GDSGGP + N G L G S+ C+ + + FAR
Sbjct: 142 QRAAGG---CQGDSGGPFVCNEGGKWVLRGAVSW-GHEMCRTDYYTVFAR 187
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 501 AGGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
AGG+ C+GDSGGPL+ NG + G +S+
Sbjct: 126 AGGIDACQGDSGGPLVCEYNGRWHIEGATSW 156
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
GG+ C+GDSGGP++ NG L G+ S+
Sbjct: 272 GGIDSCQGDSGGPMVCENNGRFYLDGVVSW 301
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 507 NGAGGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
N GGV C+GDSGGPL+ L G++S+
Sbjct: 804 NPEGGVDTCQGDSGGPLVCQHGNQWFLTGVTSW 836
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 34.3 bits (75), Expect = 0.096
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 594 EPSEPASDHSATVHGRFR*QLREELKHLQNGAGGVGICRGDSGGPLLL-NRNGVLTLIGI 418
+ S P S G + ++ E + GGV C+GDSGGPL+ + NG L G+
Sbjct: 176 QASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPLVCEDTNGRWHLEGV 235
Query: 417 SSF 409
+S+
Sbjct: 236 TSW 238
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQ--NRCQDGFPSAFARVTSF-NNFIRQH 328
GGV C+ DSGGPL G L G+ S+ + N + G + A + ++ N I++H
Sbjct: 166 GGVDACQYDSGGPLACEERGRWYLTGVVSYGHECGNPHKYGLYADMATLNTWVENIIQEH 225
Query: 327 L 325
L
Sbjct: 226 L 226
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 501 AGGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
AGG+ C+GDSGGPL+ G + G +S+
Sbjct: 470 AGGIDACQGDSGGPLVCEYKGRWHIEGATSW 500
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 483 CRGDSGGP-LLLNRNGVLTLIGISSFVAQNRCQDG-FPSAFARVTSFNNFIRQHL 325
C GDSGGP + + +G L G S+ RC + F RV F N+I +H+
Sbjct: 243 CHGDSGGPYVCIQPDGRYVLQGDVSW-GSGRCDSSQMFTVFGRVAHFRNWIDRHM 296
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
GG+ C+GDSGGP++ G + G +S+
Sbjct: 876 GGIDTCQGDSGGPMVCESRGRFYIHGATSW 905
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
GG G C+ DSGGPL + G+ + GI S+
Sbjct: 219 GGCGPCQFDSGGPLACSEGGLWYMYGIVSY 248
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 546 FR*QLREELKHLQNGAGGVGICRGDSGGPL 457
+R Q+ E + AGGV C+GDSGGP+
Sbjct: 485 YRGQIHESMLCAGLDAGGVDACQGDSGGPM 514
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
GG+ C+GDSGGP++ G + G +S+
Sbjct: 77 GGIDACQGDSGGPMVCENGGRFYIHGATSW 106
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLL-NRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
G G C GDSGGP + N G L G+ S+ S FARV+ ++I
Sbjct: 217 GKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 401 WATKELIPIKVSTPLRFNKSGPPESPRQIPTPPAPF 508
+A ++ P+ S PLR P ++P+ PP PF
Sbjct: 127 YALQQTTPLHTSQPLRPTPRRPSDTPQPFTPPPRPF 162
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 504 GAGGVGICRGDSGGPLLLNRNGVLTLIG 421
G G G C+GDSGGP + G L G
Sbjct: 205 GGQGKGGCQGDSGGPFVCEEGGKWVLRG 232
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 483 CRGDSGGP-LLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFIRQHL 325
C GDSGGP + + +G L G S+ + + F RV F N+I H+
Sbjct: 14 CHGDSGGPYVCVQPDGRYVLQGDVSWGSGKCDAKQMFTVFGRVAHFRNWIDHHM 67
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLL-NRNGVLTLIGISSF 409
GG C GDSGGPL+ N +G L G+ S+
Sbjct: 171 GGRDSCGGDSGGPLVCSNADGQYVLRGVVSW 201
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = -2
Query: 501 AGGVGICRGDSGGPLLL--NRNGVLTLIGISSFVAQNRCQDGFPS---AFARVTSFNNFI 337
+GG IC+GDSGG +L + L G+ S+ + C G P+ + RVT F +I
Sbjct: 298 SGGKDICQGDSGGGFVLYDSAKQKWFLGGVVSWGSSLGC--GLPNKYGVYVRVTQFLGWI 355
Query: 336 RQH 328
H
Sbjct: 356 LLH 358
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLL---NRNGVLTLIGISSF 409
GGV C+GDSGGP + TL+G++S+
Sbjct: 401 GGVDSCQGDSGGPFVCTNPENPRQWTLVGVTSW 433
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/26 (42%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -2
Query: 483 CRGDSGGPLLLNR-NGVLTLIGISSF 409
C+GDSG P+++ R +G + +G+SS+
Sbjct: 913 CKGDSGSPIVVKRTDGSWSAVGLSSW 938
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 504 GAGG-VGICRGDSGGPLLL-NRNGVLTLIGISSFVAQNRCQDGFP--SAFARVTSFNNFI 337
GAG + C GDSGGP + N + G+ S+ C G + +ARV F +I
Sbjct: 1507 GAGSTISGCFGDSGGPFVCQGSNKRWNIQGVVSW-GTRTCSSGQNEYTVYARVAQFVPWI 1565
Query: 336 RQHL 325
R+++
Sbjct: 1566 RKYI 1569
>SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1)
Length = 122
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/116 (20%), Positives = 43/116 (37%)
Frame = +2
Query: 44 LYNYIFKLNRTFHSVYKYDSSVFNIINCG*IFSVTLFGTDIFNYHHK*KNYASKYFKSVX 223
+YNY + + +Y Y V+N V + D++NY+ NY +
Sbjct: 8 VYNYYLDVYNYYLDIYNYYLDVYNY-----YLDVYNYYLDVYNYYLDVYNYYLDVYNYYL 62
Query: 224 XXXXXXXXKFPYIYFWHEYVMLLYGT*PYFSSVYKCWRMKLLKLVTLAKADGNPSW 391
+ Y + Y + +Y Y+ VY + L K V + K P++
Sbjct: 63 DVYNYYLDVYNYYLDVYNYYLDVYN---YYLDVYNKDKCPLAKSVGICKCYLGPAY 115
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSF 409
GGV C+ DSGGPL + L G+ S+
Sbjct: 227 GGVDACQFDSGGPLSCSIGSRFYLTGVVSW 256
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,345,058
Number of Sequences: 59808
Number of extensions: 408208
Number of successful extensions: 1249
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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