Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0318
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 37 0.012
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 36 0.021
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 33 0.15
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 30 1.4
AF022983-1|AAB69946.2| 324|Caenorhabditis elegans Serpentine re... 30 1.8
Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical p... 29 2.4
U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical... 29 4.2
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 28 7.3
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 28 7.3
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 28 7.3
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 28 7.3
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 28 7.3
AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical ... 28 7.3
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 28 7.3
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 28 7.3
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNRNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
G + C+GDSGGPL+ R+G L G+ S+ + G P + V S + +I
Sbjct: 232 GKIDSCQGDSGGPLMCARDGHWELTGVVSW-GIGCARPGMPGVYGNVHSASTWI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 36.3 bits (80), Expect = 0.021
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = -2
Query: 576 SDHSATVHGRFR*QLREELKHLQNGAGGV--GICRGDSGGPLLLNR-NGVLTLIGISSFV 406
SD RF L ++ Q AG G GDSGGPLL+++ NG IGI+S+
Sbjct: 192 SDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYG 251
Query: 405 AQNR----CQDGFPSAFARVTSFNNFIR 334
A Q FP + R++ + +I+
Sbjct: 252 ADGLDGVIDQGKFPGVYTRISKYVPWIQ 279
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 498 GGVGICRGDSGGPLLLNR-NGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 337
GG+ C+GDSGGP R +G L G+ S+ Q P + V + ++I
Sbjct: 203 GGIDSCQGDSGGPFACRREDGAFVLAGVISW-GDGCAQKKQPGIYTMVAPYLSWI 256
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 471 SGGPLLLNRNGVLTLIGISSFVAQNRCQ 388
+GGPL+LN +G T+IG+ + ++ C+
Sbjct: 236 AGGPLILNVSGKATVIGLKAPASRENCE 263
>AF022983-1|AAB69946.2| 324|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 16 protein.
Length = 324
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 92 YRLNEMFYLI*IYNYIVPMYICTWSKK 12
Y L E+ Y + IY+ I+P YI +SKK
Sbjct: 269 YALFEVIYFVPIYSLIMPAYIYQFSKK 295
>Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical
protein T04A8.15 protein.
Length = 718
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 200 THNFFTCDDN*KYQCQTALLK 138
TH F TC D + +CQT +LK
Sbjct: 245 THIFITCSDGHRVKCQTMILK 265
>U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical
protein C45G9.10a protein.
Length = 971
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 286 VVVWNLTLFQFSL*MLADEIVETCNSG 366
+V+WNL +F S+ +LA+ + CN+G
Sbjct: 1 MVLWNLFVFATSVILLAEGTFDNCNNG 27
>U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical
protein F08D12.6 protein.
Length = 498
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 53 YIFKLNR--TFHSVYKYDSSVFNIINCG*IFSVTLFGTDIF 169
+IF N T+ S YKY+ ++N+ +CG I + T F T+ F
Sbjct: 62 HIFSSNSVMTYLSFYKYNFDLWNVQSCGSIIA-TEFDTNFF 101
>AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical
protein Y37A1B.13 protein.
Length = 412
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 100 FFCF*YY*LWINIFSNAVWH*YFQLSSQVKKLCVQVF*ECIFSLASSLTKVSLY 261
FF F + IN+F + H YF +S ++ +F FS S L+ + Y
Sbjct: 20 FFIFKFRYQCINLFFGVISHGYFDVSKNT-QITSDIFCSISFSFTSHLSNILFY 72
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 65 LNRTFHSVYKYDSSVFNIINC 127
L RT+ S YDSS FN INC
Sbjct: 1324 LIRTYPSAKHYDSSNFNPINC 1344
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 65 LNRTFHSVYKYDSSVFNIINC 127
L RT+ S YDSS FN INC
Sbjct: 1324 LIRTYPSAKHYDSSNFNPINC 1344
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 65 LNRTFHSVYKYDSSVFNIINC 127
L RT+ S YDSS FN INC
Sbjct: 1324 LIRTYPSAKHYDSSNFNPINC 1344
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
F31B12.1c protein.
Length = 1895
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 65 LNRTFHSVYKYDSSVFNIINC 127
L RT+ S YDSS FN INC
Sbjct: 1324 LIRTYPSAKHYDSSNFNPINC 1344
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
F31B12.1b protein.
Length = 1868
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 65 LNRTFHSVYKYDSSVFNIINC 127
L RT+ S YDSS FN INC
Sbjct: 1324 LIRTYPSAKHYDSSNFNPINC 1344
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
F31B12.1a protein.
Length = 1898
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 65 LNRTFHSVYKYDSSVFNIINC 127
L RT+ S YDSS FN INC
Sbjct: 1324 LIRTYPSAKHYDSSNFNPINC 1344
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 557 CMAVFGSNFVRNSNICRTELAVSVFAAETPA 465
C AV +++V+NS CR ++ V A TP+
Sbjct: 311 CEAVNSNSYVKNSQECREIISAMVLDAMTPS 341
>AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical
protein Y116A8B.5 protein.
Length = 435
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 677 LFVGQWAVAAGYGLTSDAQTGISVNQVMSQVNLQVITVQQCMAVFGSNFVRNSNICRTEL 498
L GQW G + G SVN+++S + V++ + MAV N N+ + L
Sbjct: 102 LLKGQWLF--GVAMCKVYWFGESVNKLLSSFLMTVLSWDRYMAVCSPN-AYNATALKVLL 158
Query: 497 AVSVFA 480
A ++FA
Sbjct: 159 ACTIFA 164
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 557 CMAVFGSNFVRNSNICRTELAVSVFAAETPA 465
C AV +++V+NS CR ++ V A TP+
Sbjct: 311 CEAVNSNSYVKNSQECREIISAMVLDAMTPS 341
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 65 LNRTFHSVYKYDSSVFNIINC 127
L RT+ S YDSS FN INC
Sbjct: 1324 LIRTYPSAKHYDSSNFNPINC 1344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,500,378
Number of Sequences: 27780
Number of extensions: 327803
Number of successful extensions: 981
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -