Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0317
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 141 4e-34
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 141 4e-34
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 140 1e-33
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 140 1e-33
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 130 8e-31
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 130 8e-31
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 123 9e-29
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 69 3e-12
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 69 3e-12
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 69 3e-12
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 69 4e-12
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 68 6e-12
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 68 6e-12
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 68 6e-12
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 68 6e-12
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 64 1e-10
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 3e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 52 3e-07
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.6
At1g77800.1 68414.m09059 PHD finger family protein contains Pfam... 30 1.6
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.1
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.7
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 8.4
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 27 8.4
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 8.4
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 141 bits (341), Expect = 4e-34
Identities = 56/63 (88%), Positives = 63/63 (100%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKH
Sbjct: 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKH 61
Query: 181 VPR 189
VPR
Sbjct: 62 VPR 64
Score = 131 bits (316), Expect = 5e-31
Identities = 65/91 (71%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXX 436
HPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 88 HPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGS 147
Query: 437 XXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ERLSVDYGKKSKL F SP+ S
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/50 (72%), Positives = 46/50 (92%)
Frame = +3
Query: 510 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERP
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERP 222
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 198 VDLEPTVVDEVRTGTYRQLFIQNNLL 275
VDLEPTV+DEVRTGTYRQLF L+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLI 93
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 141 bits (341), Expect = 4e-34
Identities = 56/63 (88%), Positives = 63/63 (100%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKH
Sbjct: 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKH 61
Query: 181 VPR 189
VPR
Sbjct: 62 VPR 64
Score = 131 bits (316), Expect = 5e-31
Identities = 65/91 (71%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXX 436
HPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 88 HPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGS 147
Query: 437 XXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ERLSVDYGKKSKL F SP+ S
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/50 (72%), Positives = 46/50 (92%)
Frame = +3
Query: 510 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERP
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERP 222
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 198 VDLEPTVVDEVRTGTYRQLFIQNNLL 275
VDLEPTV+DEVRTGTYRQLF L+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLI 93
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 140 bits (338), Expect = 1e-33
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKH
Sbjct: 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKH 61
Query: 181 VPR 189
VPR
Sbjct: 62 VPR 64
Score = 131 bits (316), Expect = 5e-31
Identities = 65/91 (71%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXX 436
HPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 88 HPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGS 147
Query: 437 XXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ERLSVDYGKKSKL F SP+ S
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Score = 87.4 bits (207), Expect = 7e-18
Identities = 36/50 (72%), Positives = 47/50 (94%)
Frame = +3
Query: 510 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERP
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERP 222
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 198 VDLEPTVVDEVRTGTYRQLFIQNNLL 275
VDLEPTV+DEVRTGTYRQLF L+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLI 93
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 140 bits (338), Expect = 1e-33
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKH
Sbjct: 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKH 61
Query: 181 VPR 189
VPR
Sbjct: 62 VPR 64
Score = 131 bits (316), Expect = 5e-31
Identities = 65/91 (71%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXX 436
HPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+
Sbjct: 88 HPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGS 147
Query: 437 XXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ERLSVDYGKKSKL F SP+ S
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Score = 87.4 bits (207), Expect = 7e-18
Identities = 36/50 (72%), Positives = 47/50 (94%)
Frame = +3
Query: 510 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERP
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERP 222
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 198 VDLEPTVVDEVRTGTYRQLFIQNNLL 275
VDLEPTV+DEVRTGTYRQLF L+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLI 93
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 130 bits (314), Expect = 8e-31
Identities = 63/91 (69%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXX 436
HPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 88 HPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGS 147
Query: 437 XXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ERLSVDYGKKSKL F SP+ S
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTIYPSPQVS 178
Score = 122 bits (295), Expect = 2e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKH
Sbjct: 2 REIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKH 61
Query: 181 VPR 189
VPR
Sbjct: 62 VPR 64
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +3
Query: 510 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
P+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 198 VDLEPTVVDEVRTGTYRQLFIQNNLL 275
VDLEPTV+DEVRTGTYRQLF L+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLI 93
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 130 bits (314), Expect = 8e-31
Identities = 63/91 (69%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXX 436
HPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 88 HPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGS 147
Query: 437 XXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ERLSVDYGKKSKL F SP+ S
Sbjct: 148 GLGSLLLERLSVDYGKKSKLGFTIYPSPQVS 178
Score = 122 bits (295), Expect = 2e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKH
Sbjct: 2 REIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKH 61
Query: 181 VPR 189
VPR
Sbjct: 62 VPR 64
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +3
Query: 510 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
P+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 198 VDLEPTVVDEVRTGTYRQLFIQNNLL 275
VDLEPTV+DEVRTGTYRQLF L+
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLI 93
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 123 bits (297), Expect = 9e-29
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXX 436
HPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+
Sbjct: 88 HPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGS 147
Query: 437 XXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ERLSVD+GKKSKL F SP+ S
Sbjct: 148 GLGSLLLERLSVDFGKKSKLGFTIYPSPQVS 178
Score = 117 bits (282), Expect = 6e-27
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+H
Sbjct: 2 REIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQH 61
Query: 181 VPR 189
VPR
Sbjct: 62 VPR 64
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/50 (76%), Positives = 46/50 (92%)
Frame = +3
Query: 510 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
P+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LDIERP
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERP 222
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = +3
Query: 141 FQHFLQRDRSWQARTPCCLVDLEPTVVDEVRTGTYRQLFIQNNLL 275
F F S Q +DLEPTV+DEVRTGTYRQLF L+
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLI 93
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 251 VVHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXX 430
+ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGT 143
Query: 431 XXXXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + L F+ SP+ S
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 60.9 bits (141), Expect = 7e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 501 SHLPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
S P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 168 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGA 171
RE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEASC 56
Query: 172 GKHVPR 189
G++VPR
Sbjct: 57 GRYVPR 62
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLL 275
L+DLEP +D VRTG Y Q+F +N +
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFV 91
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 251 VVHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXX 430
+ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 85 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGT 144
Query: 431 XXXXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + L F+ SP+ S
Sbjct: 145 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 177
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 501 SHLPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
S P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 169 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP 221
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G++
Sbjct: 2 REILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGRY 60
Query: 181 VPR 189
VPR
Sbjct: 61 VPR 63
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLL 275
L+DLEP +D +R+G Y Q+F +N +
Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFV 92
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 251 VVHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXX 430
+ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 85 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGT 144
Query: 431 XXXXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + L F+ SP+ S
Sbjct: 145 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 177
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 501 SHLPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
S P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 169 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP 221
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G++
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRY 60
Query: 181 VPR 189
VPR
Sbjct: 61 VPR 63
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLL 275
L+DLEP +D +R+G + Q+F +N +
Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFV 92
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 251 VVHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXX 430
+ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGT 143
Query: 431 XXXXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + L F+ SP+ S
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 63.7 bits (148), Expect = 1e-10
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLLLVRK------MRXXXXXXXXXXLERKS*IWFWT 356
L+DLEP +D VR+G Y Q+F +N + + + +
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 357 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTARSLNWSSHLPAPQVSTAV 536
E+ L VC T S +G+L + R + S P+P+VS V
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGS----GMGTLLI-SKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 537 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
VEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGRF 59
Query: 181 VPR 189
VPR
Sbjct: 60 VPR 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +2
Query: 260 PEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXX 439
P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
Query: 440 XXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + L F+ SP+ S
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLLLVRK------MRXXXXXXXXXXLERKS*IWFWT 356
L+DLEP +D +R+G Y Q F +N + + + +
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 357 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTARSLNWSSHLPAPQVSTAV 536
E+ L VC T S +G+L + R + S P+P+VS V
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGS----GMGTLLI-SKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 537 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
VEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGRF 59
Query: 181 VPR 189
VPR
Sbjct: 60 VPR 62
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +2
Query: 260 PEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXX 439
P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
Query: 440 XXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + L F+ SP+ S
Sbjct: 147 MGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLLLVRK------MRXXXXXXXXXXLERKS*IWFWT 356
L+DLEP +D +R+G Y Q F +N + + + +
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 357 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTARSLNWSSHLPAPQVSTAV 536
E+ L VC T S +G+L + R + S P+P+VS V
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGS----GMGTLLI-SKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 537 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
VEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGRF 59
Query: 181 VPR 189
VPR
Sbjct: 60 VPR 62
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 251 VVHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXX 430
+ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGT 143
Query: 431 XXXXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + + F+ SP+ S
Sbjct: 144 GSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Score = 61.7 bits (143), Expect = 4e-10
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLLLVRK------MRXXXXXXXXXXLERKS*IWFWT 356
L+DLEP +D +R+G + Q+F +N + + + +
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 357 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTARSLNWSSHLPAPQVSTAV 536
E+ L VC T S +G+L + R + S P+P+VS V
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGS----GMGTLLI-SKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 537 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
VEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANP 220
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK+
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGKY 59
Query: 181 VPR 189
VPR
Sbjct: 60 VPR 62
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 251 VVHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXX 430
+ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H
Sbjct: 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGT 143
Query: 431 XXXXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + + F+ SP+ S
Sbjct: 144 GSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Score = 64.5 bits (150), Expect = 6e-11
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLLLVRK------MRXXXXXXXXXXLERKS*IWFWT 356
L+DLEP +D VR+G Y Q+F +N + + + +
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 357 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTARSLNWSSHLPAPQVSTAV 536
E+ L VC T S +G+L + R + S P+P+VS V
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGS----GMGTLLI-SKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 537 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
VEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP 220
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G++
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGRY 59
Query: 181 VPR 189
VPR
Sbjct: 60 VPR 62
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +2
Query: 251 VVHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXX 430
+ P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ LQGF + H
Sbjct: 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGT 143
Query: 431 XXXXXXLLMERLSVDYGKKSKLEFA---SPRAS 520
LL+ ++ +Y + + F+ SP+ S
Sbjct: 144 GSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Score = 62.1 bits (144), Expect = 3e-10
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Frame = +3
Query: 195 LVDLEPTVVDEVRTGTYRQLFIQNNLLLVRK------MRXXXXXXXXXXLERKS*IWFWT 356
L+DLEP +D +R+G + Q+F +N + + + +
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 357 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTARSLNWSSHLPAPQVSTAV 536
E++ L VC T S +G+L + R + S P+P+VS V
Sbjct: 125 ENSDCLQGFQVCHSLGGGTGS----GMGTLLI-SKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 537 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
VEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANP 220
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK+
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGKY 59
Query: 181 VPR 189
VPR
Sbjct: 60 VPR 62
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 181 VPR 189
+PR
Sbjct: 61 IPR 63
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 290 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 469
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 470 VDYGKK 487
Y KK
Sbjct: 159 DRYSKK 164
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 519 QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
+ S VV+PYNS+LT ++DC ++DN A+ I L + P
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNP 223
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 1 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 180
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 181 VPR 189
+PR
Sbjct: 61 IPR 63
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 290 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 469
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 470 VDYGKK 487
Y KK
Sbjct: 159 DRYSKK 164
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 519 QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 659
+ S VV+PYNS+LT ++DC ++DN A+ I L + P
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNP 223
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 650 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 516
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g77800.1 68414.m09059 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1423
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 474 TTARSLNWSSHLPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRN 641
T+ R + SSHL PQ ++++ S + +H F+V+N DICRR+
Sbjct: 956 TSRRKVVGSSHL-VPQTKESLLKMAVSGPPSEKRSDHHTPDFLVENPRTCDICRRS 1010
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 433 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 335
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 167 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 42
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 365 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 276
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 221 NNSRFKIDETARGTCLPAPVSLKKVLKESSPPPM 120
N R K ++ + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 365 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 276
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,148,821
Number of Sequences: 28952
Number of extensions: 331011
Number of successful extensions: 1063
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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