Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0316
(441 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 51 5e-07
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 51 5e-07
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 6e-07
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 37 0.008
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 28 3.0
SB_42230| Best HMM Match : PFK (HMM E-Value=0) 28 3.0
SB_22153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_4638| Best HMM Match : DUF1283 (HMM E-Value=0.46) 27 9.1
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 50.8 bits (116), Expect = 5e-07
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Frame = +3
Query: 9 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGC-------TNNL-CS 164
+RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC +N L C
Sbjct: 16 VRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGCRDIADGPSNALKCD 72
Query: 165 HNRAYEVFAATIT 203
H RA++ F +IT
Sbjct: 73 HVRAHDYFTESIT 85
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 50.8 bits (116), Expect = 5e-07
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Frame = +3
Query: 9 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGCTN--------NLCS 164
+RL T+DA +V+VIHT G+ IGH DF+ NG QPGC N C
Sbjct: 237 VRLDTSDALFVDVIHTSAD----YGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCG 292
Query: 165 HNRAYEVFAATI-THGKHYGNQCSTEAEITA 254
H RA +F ++ T Y C +E + +
Sbjct: 293 HKRAPALFTTSLYTKTPLYSYPCRSEDDFNS 323
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 50.4 bits (115), Expect = 6e-07
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = +3
Query: 9 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGCTNNL--------CS 164
+RL +DA +V+V+HTD ++ G GHIDF+ NG QPGC + L C
Sbjct: 735 VRLDPSDADFVDVMHTD---MDLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICD 791
Query: 165 HNRAYEVFAATIT 203
H RA E +A ++T
Sbjct: 792 HMRAPEYYAESVT 804
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 36.7 bits (81), Expect = 0.008
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +3
Query: 9 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGCT 149
+RL DAQ+V+VIHT G+ GH+DF+ NG Q GC+
Sbjct: 219 VRLDRLDAQFVDVIHTS----YVFGITAPHGHMDFYPNGGTSQRGCS 261
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 108 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 242
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 75 KNGLGIAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 176
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAI-GHID-FFVNGRLVQPGCTNNLCSHNRAYE 182
+ + +++ ++ + SG + + HID +NG +V PG + Y
Sbjct: 1 MSMSSDEVNFLVYRYLQESGFQHSAFTFGVESHIDQSSINGSVVPPGALVTILQKGVQYV 60
Query: 183 VFAATITHGKHYGNQCSTEAEI 248
AT+T G Y +T E+
Sbjct: 61 EAEATVTEGVQYVEAEATVTEV 82
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 417 VETNFIGHHRKLRFKFCRHHKWN 349
VE NF+GH R+ R CR K N
Sbjct: 233 VERNFVGHRRRCRRVVCRATKSN 255
>SB_42230| Best HMM Match : PFK (HMM E-Value=0)
Length = 1103
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 305 ALQVWQYPFQLEILGNYCGYLRFCAALIS 219
AL + F +E +G YCGYL +AL S
Sbjct: 1016 ALSSHKRVFVIECMGGYCGYLATMSALAS 1044
>SB_22153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 299 QVWQYPFQLEILGNYCGYLRFCAALISVMFAMRDCCSKNF 180
+VW + Q++I GN L C + ++ +R+ S+NF
Sbjct: 186 KVWFFVDQIQIKGNTVPLLNICTYVRKIVREIREQRSRNF 225
>SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1093
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 318 IPDPCFTSLA-VPISTRNPRQLLRLSPLLCCTDFRNVCHA*LLQQKLHKRDCGYIS 154
IP PC+ P+S + LL+ L FR V L +++HK++CG ++
Sbjct: 571 IPPPCYGQFVNKPLSNID---LLKWVTKLGVEHFRGVYSRDDLPKRIHKKECGIVN 623
>SB_4638| Best HMM Match : DUF1283 (HMM E-Value=0.46)
Length = 986
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 239 SGDNRNNCRGFLVEMGTAKLVKHGSGMFRVNTGMRYPFHL*CLQNLKRS 385
S D N CR +V +G + + +R+ G P+ L +NLK S
Sbjct: 623 SSDMCNGCRARMVGLGVLEPEQGSHIAYRLTKGYPLPWELLFSRNLKES 671
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,291,420
Number of Sequences: 59808
Number of extensions: 305584
Number of successful extensions: 873
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 859323430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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