Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0315
         (523 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D573A2 Cluster: PREDICTED: similar to CG10849-PA...    38   0.11 
UniRef50_Q9NZ01 Cluster: Synaptic glycoprotein SC2; n=29; Eumeta...    36   0.74 
UniRef50_Q52L67 Cluster: Gpsn2 protein; n=30; Coelomata|Rep: Gps...    35   1.3  
UniRef50_Q9ZDB3 Cluster: DNA polymerase III subunit beta; n=10; ...    34   1.7  
UniRef50_Q5XJA6 Cluster: Zgc:103479; n=3; Euteleostomi|Rep: Zgc:...    33   5.2  
UniRef50_A2WPQ8 Cluster: Putative uncharacterized protein; n=4; ...    32   6.9  
UniRef50_Q8FNT9 Cluster: Cell division protein FtsW; n=5; Coryne...    32   9.2  
UniRef50_Q4HSL1 Cluster: Phosphate ABC transporter, periplasmic ...    32   9.2  
UniRef50_Q1CWB9 Cluster: Putative uncharacterized protein; n=2; ...    32   9.2  

>UniRef50_UPI0000D573A2 Cluster: PREDICTED: similar to CG10849-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG10849-PA - Tribolium castaneum
          Length = 330

 Score = 38.3 bits (85), Expect = 0.11
 Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
 Frame = +1

Query: 118 MEIEILSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQASNWRLKANVER*RY 297
           +E+E++  +S KP+GK+ +   +++K++K++I ++ +  L  +RQ+     K   E+   
Sbjct: 3   LELEVVK-TSGKPVGKVSLASSATVKDLKKEIFKNFR--LGVERQSIRNGPKGKDEKDSQ 59

Query: 298 SEFP*Y-SRRSKLFLKDLDSSILAECV-LAEYAGPLFVY 408
                +      +++KDL   I  + V   EYAGP+F+Y
Sbjct: 60  EVGKIHLETAGTIYVKDLGPQIGWDTVFFLEYAGPIFLY 98


>UniRef50_Q9NZ01 Cluster: Synaptic glycoprotein SC2; n=29;
           Eumetazoa|Rep: Synaptic glycoprotein SC2 - Homo sapiens
           (Human)
          Length = 308

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
 Frame = +2

Query: 275 QTLKDEDTLNSLNIQDGPS-FF*KIWTQVSWRNVF*LNMLDHSLFTW--GDQRPWILYGT 445
           ++LKDED L  L +    + +F  +  Q+SW  VF L      LF +     R   +YG 
Sbjct: 57  KSLKDEDVLQKLPVGTTATLYFRDLGAQISWVTVF-LTEYAGPLFIYLLFYFRVPFIYGH 115

Query: 446 Q---TSSPEQVATVAAICWSAHYAKGCLK 523
           +   TSS   V  +A IC S HY K  L+
Sbjct: 116 KYDFTSSRHTVVHLACICHSFHYIKRLLE 144


>UniRef50_Q52L67 Cluster: Gpsn2 protein; n=30; Coelomata|Rep: Gpsn2
           protein - Mus musculus (Mouse)
          Length = 362

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
 Frame = +2

Query: 275 QTLKDEDTLNSLNIQDGPS-FF*KIWTQVSWRNVF*LNMLDHSLFTW--GDQRPWILYGT 445
           ++LKDED L  L +    + +F  +  Q+SW  VF L      LF +     R   +YG 
Sbjct: 111 KSLKDEDVLQKLPVGTTATLYFRDLGAQISWVTVF-LTEYAGPLFIYLLFYFRVPFIYGR 169

Query: 446 Q---TSSPEQVATVAAICWSAHYAKGCLK 523
           +   TSS   V  +A +C S HY K  L+
Sbjct: 170 KYDFTSSRHTVVHLACMCHSFHYIKRLLE 198


>UniRef50_Q9ZDB3 Cluster: DNA polymerase III subunit beta; n=10;
           Rickettsia|Rep: DNA polymerase III subunit beta -
           Rickettsia prowazekii
          Length = 381

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 29/79 (36%), Positives = 37/79 (46%)
 Frame = -3

Query: 365 AKILESRSFKKSLDRLEY*GNSEYLHLSTFAFSLQFEA*RSGYRDFFTLCWIFSFTFFIE 186
           AKI+ES  F  SLD   Y  N  YLH+    F   F A   GYR   ++ WI   T   +
Sbjct: 136 AKIIESTKFSISLDETRYNLNGIYLHIKDKEF---FAASTDGYR--LSISWI---TLEEK 187

Query: 185 LSPVT*ILPSGFALDTLRI 129
           +     ILP   A + L+I
Sbjct: 188 IKNFGVILPQKSAEEILKI 206


>UniRef50_Q5XJA6 Cluster: Zgc:103479; n=3; Euteleostomi|Rep:
           Zgc:103479 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 349

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
 Frame = +1

Query: 121 EIEILSVSSAKPLGKIH-VTGESSIKNVKEKIQQSVKKSLYPDRQASNWRL--KANVER* 291
           E+EIL   S   L  +  V   ++I  +K    ++  K LYP RQA       KA  +  
Sbjct: 46  EVEILDPKSKAQLCYLDKVVPSATIAEIKGLFHKTYPK-LYPSRQALKLHPEGKALNDED 104

Query: 292 RYSEFP*YSRRSKLFLKDLDSSILAECV-LAEYAGPLFVYL 411
              + P     + +F +DL   I    V LAE  GPLFVYL
Sbjct: 105 VLEDLP-VGTTATMFFQDLGPQIGWTMVFLAECLGPLFVYL 144


>UniRef50_A2WPQ8 Cluster: Putative uncharacterized protein; n=4;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 539

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 424 SLITPSKQRVVQHIQLKHIPPRYLSP 347
           SL  PS Q +V  I + H+PPRYL P
Sbjct: 3   SLPVPSVQAMVAAIGIDHVPPRYLRP 28


>UniRef50_Q8FNT9 Cluster: Cell division protein FtsW; n=5;
           Corynebacterium|Rep: Cell division protein FtsW -
           Corynebacterium efficiens
          Length = 560

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 428 WILYGTQTSSPEQVATVAAICWSAHYAKG 514
           WI+ G     P ++A V  + W AHY  G
Sbjct: 147 WIVLGPLRFQPSEIAKVTIVIWGAHYLAG 175


>UniRef50_Q4HSL1 Cluster: Phosphate ABC transporter, periplasmic
           phosphate-binding protein; n=1; Campylobacter
           upsaliensis RM3195|Rep: Phosphate ABC transporter,
           periplasmic phosphate-binding protein - Campylobacter
           upsaliensis RM3195
          Length = 275

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +1

Query: 136 SVSSAKPLGKIHVTGESSIKNVKEKIQQSVK 228
           S  SAKP GK+ V G SS+  + EK+ +S K
Sbjct: 157 SFQSAKPEGKLIVAGSSSVTPLMEKLAESYK 187


>UniRef50_Q1CWB9 Cluster: Putative uncharacterized protein; n=2;
           Cystobacterineae|Rep: Putative uncharacterized protein -
           Myxococcus xanthus (strain DK 1622)
          Length = 305

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -1

Query: 358 YLSPDLLKKAWTVLNIKGIQSIFIFQRLPLASSLRPDDLGIEISSRSVG 212
           + +PD L++   +LN + +++ F  Q+L     L PDD  + +  R +G
Sbjct: 255 FANPDALRRRLALLNREAVRADFASQQLARTPGLLPDDTTLVVLRRRMG 303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,266,838
Number of Sequences: 1657284
Number of extensions: 8791741
Number of successful extensions: 20937
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20929
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)