Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0314
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53150-1|AAA96123.2|  302|Caenorhabditis elegans Serpentine rece...    28   4.4  
Z81546-6|CAB04457.1|  425|Caenorhabditis elegans Hypothetical pr...    27   5.8  

>U53150-1|AAA96123.2|  302|Caenorhabditis elegans Serpentine
           receptor, class sx protein32 protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 17  NSLQIVYYLKNTNIHYEIVHYLVTSGCV 100
           NS+ I+ ++K  N H    HY++T  C+
Sbjct: 27  NSIMIILFIKEKNFH-SPCHYMITFSCL 53


>Z81546-6|CAB04457.1|  425|Caenorhabditis elegans Hypothetical
           protein F53A2.9 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -1

Query: 421 ENLKVT*TFV*YNSGDYRQFWLRNI*IYSIRLKL 320
           E L+++ TFV   +  Y ++WLRN  I ++R+K+
Sbjct: 137 EKLRLSATFV-ERTSRYIEYWLRNFQIDTLRIKV 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,330,033
Number of Sequences: 27780
Number of extensions: 235974
Number of successful extensions: 517
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)