Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0314
(502 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 2.4
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 2.4
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 22 3.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 3.1
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 21 5.5
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 21 5.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 5.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.5
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 280 QFSFPHISCF*ITIISDVLNIFKCSLTKIVY 372
Q +PH+ + +II ++ NI KIVY
Sbjct: 269 QLYYPHVPEYSSSIIMELHNIEGTHYVKIVY 299
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 280 QFSFPHISCF*ITIISDVLNIFKCSLTKIVY 372
Q +PH+ + +II ++ NI KIVY
Sbjct: 284 QLYYPHVPEYSSSIIMELHNIEGTHYVKIVY 314
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 294 RKRKLF*GHFLCL*RRKINVINKKQRIGL 208
R+R++ H LCL R+I + + +R+ L
Sbjct: 35 RRRRIEIAHALCLTERQIKIWFQNRRMKL 63
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -3
Query: 491 LNTIFIYVATYLCMYITILLI 429
L+ IF+++ T C+ T+L+I
Sbjct: 546 LDRIFLWIFTVACVLGTVLII 566
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 294 RKRKLF*GHFLCL*RRKINVINKKQRI 214
R+R++ H LCL R+I + + +R+
Sbjct: 35 RRRRIEIAHALCLTERQIKIWFQNRRM 61
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 294 RKRKLF*GHFLCL*RRKINVINKKQRI 214
R+R++ H LCL R+I + + +R+
Sbjct: 35 RRRRIEIAHALCLTERQIKIWFQNRRM 61
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 294 RKRKLF*GHFLCL*RRKINVINKKQRI 214
R+R++ H LCL R+I + + +R+
Sbjct: 297 RRRRIEIAHALCLTERQIKIWFQNRRM 323
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 498 LQSQYNFYLCSHVSMYVYYNFINI 427
L + YN+ ++ +YYN INI
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNIINI 341
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 446 ITILLIFL*EFKGNLNICLI 387
+T ++IF+ F GN+ C++
Sbjct: 38 LTYVVIFVTGFVGNIITCIV 57
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 486 YNFYLCSHVSMYVYYNFINI 427
Y Y ++ S +YYN INI
Sbjct: 311 YKNYNNNYNSKKLYYNIINI 330
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 486 YNFYLCSHVSMYVYYNFINI 427
Y Y ++ S +YYN INI
Sbjct: 322 YKNYNNNYNSKKLYYNIINI 341
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,026
Number of Sequences: 438
Number of extensions: 3185
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -