Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0311
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.83 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.8  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 425 LPYFDRLDYVSMMCNEQCYSLAVEKLLNSMFLC 523
           +P+   + ++ ++  EQ Y L +EK  N ++ C
Sbjct: 304 IPFRVFILWIILVPEEQVYHLEIEKYYNILYFC 336


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +2

Query: 605 VGALTPFFWLFEEREK 652
           +G+L PF WLF+++++
Sbjct: 318 LGSLPPFKWLFKKKKR 333


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 534 HQNSVCGDNPLLNTSWRSARTRSTWGRS 617
           H  ++  DNP++NT    + T   +G S
Sbjct: 66  HHQTIPQDNPIINTETGLSYTNLDYGNS 93


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 534 HQNSVCGDNPLLNTSWRSARTRSTWGRS 617
           H  ++  DNP++NT    + T   +G S
Sbjct: 66  HHQTIPQDNPIINTETGLSYTNLDYGNS 93


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 534 HQNSVCGDNPLLNTSWRSARTRSTWGRS 617
           H  ++  DNP++NT    + T   +G S
Sbjct: 66  HHQTIPQDNPIINTETGLSYTNLDYGNS 93


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -2

Query: 323 VRDAAPRERLDAGARSSGSCCVLLFGRFYDAVI 225
           +++  P    D      G CC    G  YD+ I
Sbjct: 85  IKNECPEPTCDEPVHRPGRCCKTCPGDLYDSDI 117


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 567 LNTSWRSARTRSTW 608
           L TSW  +R  S+W
Sbjct: 279 LETSWGKSRDESSW 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,698
Number of Sequences: 336
Number of extensions: 3707
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)