Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0311
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase (ubi... 230 4e-60
BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase (ubi... 230 4e-60
BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase (ubi... 230 4e-60
AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase (ubi... 230 4e-60
AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase (ubi... 230 4e-60
AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone oxidore... 230 4e-60
AF013160-1|AAC34362.1| 463|Homo sapiens NADH dehydrogenase-ubiq... 230 4e-60
AF183172-1|AAG13809.1| 38|Homo sapiens NADH-ubiquinone oxidore... 36 0.15
>BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 230 bits (562), Expect = 4e-60
Identities = 114/152 (75%), Positives = 122/152 (80%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 VRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYF 436
V+N+ LNFGPQHPAAHGVLRLV+EL GE VR DPHIGLLHRGTEKLIEYKTY QALPYF
Sbjct: 77 VKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYF 136
Query: 437 DRLDYVSMMCNEQCYSLAVEKLLNSMFLCGPSTSELCLRR*PAT---EHIMAVGTHALDV 607
DRLDYVSMMCNEQ YSLAVEKLLN P + + T HIMAV THALD+
Sbjct: 137 DRLDYVSMMCNEQAYSLAVEKLLN--IRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDL 194
Query: 608 GALTPFFWLFEEREKMMEFYERVSGARMHALH 703
GA+TPFFWLFEEREKM EFYERVSGARMHA +
Sbjct: 195 GAMTPFFWLFEEREKMFEFYERVSGARMHAAY 226
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 111 VNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAE 251
+ R +W PD ++ +QF G VMYP + T KP P+N + P +
Sbjct: 28 IQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKD 74
>BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 230 bits (562), Expect = 4e-60
Identities = 114/152 (75%), Positives = 122/152 (80%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 VRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYF 436
V+N+ LNFGPQHPAAHGVLRLV+EL GE VR DPHIGLLHRGTEKLIEYKTY QALPYF
Sbjct: 77 VKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYF 136
Query: 437 DRLDYVSMMCNEQCYSLAVEKLLNSMFLCGPSTSELCLRR*PAT---EHIMAVGTHALDV 607
DRLDYVSMMCNEQ YSLAVEKLLN P + + T HIMAV THALD+
Sbjct: 137 DRLDYVSMMCNEQAYSLAVEKLLN--IRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDL 194
Query: 608 GALTPFFWLFEEREKMMEFYERVSGARMHALH 703
GA+TPFFWLFEEREKM EFYERVSGARMHA +
Sbjct: 195 GAMTPFFWLFEEREKMFEFYERVSGARMHAAY 226
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 111 VNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAE 251
+ R +W PD ++ +QF G VMYP + T KP P+N + P +
Sbjct: 28 IQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKD 74
>BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 230 bits (562), Expect = 4e-60
Identities = 114/152 (75%), Positives = 122/152 (80%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 VRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYF 436
V+N+ LNFGPQHPAAHGVLRLV+EL GE VR DPHIGLLHRGTEKLIEYKTY QALPYF
Sbjct: 77 VKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYF 136
Query: 437 DRLDYVSMMCNEQCYSLAVEKLLNSMFLCGPSTSELCLRR*PAT---EHIMAVGTHALDV 607
DRLDYVSMMCNEQ YSLAVEKLLN P + + T HIMAV THALD+
Sbjct: 137 DRLDYVSMMCNEQAYSLAVEKLLN--IRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDL 194
Query: 608 GALTPFFWLFEEREKMMEFYERVSGARMHALH 703
GA+TPFFWLFEEREKM EFYERVSGARMHA +
Sbjct: 195 GAMTPFFWLFEEREKMFEFYERVSGARMHAAY 226
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 111 VNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAE 251
+ R +W PD ++ +QF G VMYP + T KP P+N + P +
Sbjct: 28 IQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKD 74
>AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 230 bits (562), Expect = 4e-60
Identities = 114/152 (75%), Positives = 122/152 (80%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 VRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYF 436
V+N+ LNFGPQHPAAHGVLRLV+EL GE VR DPHIGLLHRGTEKLIEYKTY QALPYF
Sbjct: 77 VKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYF 136
Query: 437 DRLDYVSMMCNEQCYSLAVEKLLNSMFLCGPSTSELCLRR*PAT---EHIMAVGTHALDV 607
DRLDYVSMMCNEQ YSLAVEKLLN P + + T HIMAV THALD+
Sbjct: 137 DRLDYVSMMCNEQAYSLAVEKLLN--IRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDL 194
Query: 608 GALTPFFWLFEEREKMMEFYERVSGARMHALH 703
GA+TPFFWLFEEREKM EFYERVSGARMHA +
Sbjct: 195 GAMTPFFWLFEEREKMFEFYERVSGARMHAAY 226
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 111 VNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAE 251
+ R +W PD ++ +QF G VMYP + T KP P+N + P +
Sbjct: 28 IQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKD 74
>AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 230 bits (562), Expect = 4e-60
Identities = 114/152 (75%), Positives = 122/152 (80%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 VRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYF 436
V+N+ LNFGPQHPAAHGVLRLV+EL GE VR DPHIGLLHRGTEKLIEYKTY QALPYF
Sbjct: 77 VKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYF 136
Query: 437 DRLDYVSMMCNEQCYSLAVEKLLNSMFLCGPSTSELCLRR*PAT---EHIMAVGTHALDV 607
DRLDYVSMMCNEQ YSLAVEKLLN P + + T HIMAV THALD+
Sbjct: 137 DRLDYVSMMCNEQAYSLAVEKLLN--IRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDL 194
Query: 608 GALTPFFWLFEEREKMMEFYERVSGARMHALH 703
GA+TPFFWLFEEREKM EFYERVSGARMHA +
Sbjct: 195 GAMTPFFWLFEEREKMFEFYERVSGARMHAAY 226
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 111 VNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAE 251
+ R +W PD ++ +QF G VMYP + T KP P+N + P +
Sbjct: 28 IQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKD 74
>AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 463
Score = 230 bits (562), Expect = 4e-60
Identities = 114/152 (75%), Positives = 122/152 (80%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 VRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYF 436
V+N+ LNFGPQHPAAHGVLRLV+EL GE VR DPHIGLLHRGTEKLIEYKTY QALPYF
Sbjct: 77 VKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYF 136
Query: 437 DRLDYVSMMCNEQCYSLAVEKLLNSMFLCGPSTSELCLRR*PAT---EHIMAVGTHALDV 607
DRLDYVSMMCNEQ YSLAVEKLLN P + + T HIMAV THALD+
Sbjct: 137 DRLDYVSMMCNEQAYSLAVEKLLN--IRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDL 194
Query: 608 GALTPFFWLFEEREKMMEFYERVSGARMHALH 703
GA+TPFFWLFEEREKM EFYERVSGARMHA +
Sbjct: 195 GAMTPFFWLFEEREKMFEFYERVSGARMHAAY 226
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 111 VNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAE 251
+ R +W PD ++ +QF G VMYP + T KP P+N + P +
Sbjct: 28 IQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKD 74
>AF013160-1|AAC34362.1| 463|Homo sapiens NADH
dehydrogenase-ubiquinone Fe-S protein 2 precursor
protein.
Length = 463
Score = 230 bits (562), Expect = 4e-60
Identities = 114/152 (75%), Positives = 122/152 (80%), Gaps = 3/152 (1%)
Frame = +2
Query: 257 VRNMILNFGPQHPAAHGVLRLVLELDGETVRAADPHIGLLHRGTEKLIEYKTYTQALPYF 436
V+N+ LNFGPQHPAAHGVLRLV+EL GE VR DPHIGLLHRGTEKLIEYKTY QALPYF
Sbjct: 77 VKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYF 136
Query: 437 DRLDYVSMMCNEQCYSLAVEKLLNSMFLCGPSTSELCLRR*PAT---EHIMAVGTHALDV 607
DRLDYVSMMCNEQ YSLAVEKLLN P + + T HIMAV THALD+
Sbjct: 137 DRLDYVSMMCNEQAYSLAVEKLLN--IRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDL 194
Query: 608 GALTPFFWLFEEREKMMEFYERVSGARMHALH 703
GA+TPFFWLFEEREKM EFYERVSGARMHA +
Sbjct: 195 GAMTPFFWLFEEREKMFEFYERVSGARMHAAY 226
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 111 VNSQRDGHRWFPDPDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAE 251
+ R +W PD ++ +QF G VMYP + T KP P+N + P +
Sbjct: 28 IQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKD 74
>AF183172-1|AAG13809.1| 38|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 38
Score = 35.9 bits (79), Expect = 0.15
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 650 KMMEFYERVSGARMHALH 703
KM EFYERVSGARMHA +
Sbjct: 1 KMFEFYERVSGARMHAAY 18
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,696,262
Number of Sequences: 237096
Number of extensions: 2382670
Number of successful extensions: 5575
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5575
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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