Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0309
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.61 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   0.81 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.9  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.9  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   4.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   5.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.5  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
 Frame = +2

Query: 128 PSPTATLLLWT----GVVLPTVYTTLPSMEFPVSDSSLATFWSGSSKRRRQLGSSPLDWL 295
           P P      W      V  PTV   +P  EFP + SS A      + R   LGS+    L
Sbjct: 190 PQPVLPTYKWMQVKRNVPKPTV-PKIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSML 248

Query: 296 QL 301
            L
Sbjct: 249 SL 250


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
 Frame = +2

Query: 128 PSPTATLLLWT----GVVLPTVYTTLPSMEFPVSDSSLATFWSGSSKRRRQLGSSPLDWL 295
           P P      W      V  PTV   +P  EFP + SS A      + R   LGS+    L
Sbjct: 190 PQPVLPTYKWMQVKRNVPKPTV-PKIPPAEFPTTSSSSALESPDPASRSSCLGSNTSSML 248

Query: 296 QL 301
            L
Sbjct: 249 SL 250


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 159 VHNNNVAVGDGQQGG 115
           V+NN +  GDG  GG
Sbjct: 505 VYNNKIPTGDGALGG 519



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 492 DFYPTVQKPQPGCRVSTALTVEPTNCT 572
           D YPT++  +  C    AL  +PT+ T
Sbjct: 53  DTYPTLETCRLVCGKYGALWPQPTSVT 79


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 191 LPSMEFPVSDSSLATFWSGSSKRRRQLGSSPLDWLQL 301
           +P  EFP + SS A      + R   LGS+    L L
Sbjct: 3   IPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSL 39


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 191 LPSMEFPVSDSSLATFWSGSSKRRRQLGSSPLDWLQL 301
           +P  EFP + SS A      + R   LGS+    L L
Sbjct: 3   IPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSL 39


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 428 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 276
           SS +T    V T+PPG     T +  + S  S +SS +   +A    N   S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 428 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 276
           SS +T    V T+PPG     T +  + S  S +SS +   +A    N   S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 428 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 276
           SS +T    V T+PPG     T +  + S  S +SS +   +A    N   S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 428 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 276
           SS +T    V T+PPG     T +  + S  S +SS +   +A    N   S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 58  ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 88



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 428 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 276
           SS +T    V T+PPG     T +  + S  S +SS +   +A    N   S
Sbjct: 96  SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 147


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 428 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 276
           SS +T    V T+PPG     T +  + S  S +SS +   +A    N   S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 293 ANQVDSTPIAASVLMSQTKKLPRNCPTLGTP 201
           A+   ST +A+   +S     PR+ P L TP
Sbjct: 102 ADSTSSTGVASPQDLSTNGAPPRSTPPLSTP 132



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 428 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 276
           SS +T    V T+PPG     T +  + S  S +SS +   +A    N   S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 504 TVQKPQPGCRVSTALTVEPTNCT 572
           T+ +P  G    TAL V+PT CT
Sbjct: 31  TIYRPDNG--KFTALDVDPTLCT 51


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 78  QQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
           Q R+++ +  D P  AG+      CC L
Sbjct: 166 QNRRVKYKKEDLPAAAGKASNGNKCCCL 193


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 61  IVHGWNSNGNSAVNTMIRPALLAVSD 138
           IV   NS G  A+N +   ALLA+ D
Sbjct: 316 IVSFTNSEGLYAINEIYDNALLALLD 341


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 61  IVHGWNSNGNSAVNTMIRPALLAVSD 138
           IV   NS G  A+N +   ALLA+ D
Sbjct: 316 IVSFTNSEGLYAINEIYDNALLALLD 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,281
Number of Sequences: 336
Number of extensions: 3854
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)