Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0309
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460 30 0.082
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 33 0.12
07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521 31 0.50
05_01_0373 + 2922604-2922921 31 0.66
01_06_0993 + 33647301-33647618 31 0.66
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 31 0.87
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 31 0.87
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 31 0.87
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 31 0.87
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 31 0.87
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 31 0.87
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 31 0.87
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 31 0.87
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 30 1.5
08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931 30 1.5
02_01_0286 + 1921049-1921726 29 2.0
01_01_0570 - 4231100-4232560 29 2.0
11_08_0044 + 27962964-27963329 29 3.5
11_08_0041 + 27915463-27915828 29 3.5
10_01_0044 - 583349-584044 29 3.5
07_03_0558 + 19461369-19462448 29 3.5
04_04_1125 + 31085106-31085714 29 3.5
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 29 3.5
09_06_0081 + 20745627-20748144,20748211-20748308 28 4.6
06_01_1023 - 7996240-7996369,7997166-7997260,7997430-7997515,799... 28 4.6
10_06_0012 - 9586478-9588880 28 6.1
07_01_0862 - 7172083-7172931 28 6.1
07_01_0452 - 3418572-3418763,3419140-3419223 28 6.1
09_04_0754 - 19946423-19947061,19947315-19947429,19947509-199475... 27 8.1
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 27 8.1
04_04_0632 + 26738969-26739350,26739535-26739543,26739674-267405... 27 8.1
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334 27 8.1
>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
Length = 515
Score = 29.9 bits (64), Expect(2) = 0.082
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 318 GNAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAG 425
G G+ GG+PN G P GGN+ A + G
Sbjct: 302 GGGGKNGGGQPNNAKG-GGGAPNGGGNHPAQGKKGG 336
Score = 23.0 bits (47), Expect(2) = 0.082
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 258 GGGNWGRVHLIGFSLGAHVVGNAGRQAGG 344
G GN G+ G + + GNA AGG
Sbjct: 262 GAGNGGKKGGGGNEIPVQIKGNANNAAGG 290
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 466 PRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKP----VTLLGLPPACRPALPTTCAP 302
P +PP ++ AP R RA P L P P +PPA RPALP T AP
Sbjct: 110 PVKPPEE-LSPVGAPRSRVRAMPPSPSLSPPAKAPSHSHAKTPSMPPAERPALPPTKAP 167
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -3
Query: 496 KSP*AMRSKIPRRPPSVWIA--ST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPA 323
K+P +K P PP+ A T APA A PP L PA + PP+ PA
Sbjct: 141 KAPSHSHAKTPSMPPAERPALPPTKAPAAISPA--TPPQLSPANAHSTHHHAKPPSLPPA 198
Query: 322 LPTTCAP 302
P +P
Sbjct: 199 EPPVPSP 205
>07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521
Length = 191
Score = 31.5 bits (68), Expect = 0.50
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +3
Query: 318 GNAGRQAGGRPNRVT----GLDPAGPRWGGNNQALNRNAGAYVEAIHTDGGLLGIFDRIA 485
G+ R+ GG + V G+DPAG GG+ + R G+ A T LL I +A
Sbjct: 69 GSVARELGGVGSVVGFVGGGVDPAGCARGGHPRTARRRPGSGAAAAAT-RPLLPILPMLA 127
Query: 486 HGDFYPTVQKPQPGCRVSTALTVEP 560
GD + +P V+ A +P
Sbjct: 128 RGDRERALPSSRPDPAVAAAPRPDP 152
>05_01_0373 + 2922604-2922921
Length = 105
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 249 HQNGGGNWGRVHLIGFSLGAHVVGNA--GRQAGGRPNRVTG---LDPAGPRW 389
H+ GGG WG +G LG G GR+ G R +G L PA W
Sbjct: 19 HRWGGGGWGGAAALGAWLGGTEAGGGAWGREGGRLRRRPSGRRRLRPASATW 70
>01_06_0993 + 33647301-33647618
Length = 105
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 249 HQNGGGNWGRVHLIGFSLGAHVVGNA--GRQAGGRPNRVTG---LDPAGPRW 389
H+ GGG WG +G LG G GR+ G R +G L PA W
Sbjct: 19 HRWGGGGWGGAAALGAWLGGTEAGGGAWGREGGRLRRRPSGRRRLRPASATW 70
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 39 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 73
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 182 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 216
>01_06_0544 +
30118208-30118417,30118959-30119063,30119179-30119260,
30119415-30121250,30121327-30121445,30121563-30122006
Length = 931
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 162 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 196
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 57 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 161
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 250 IKTEAAIGVEST*LASAWARTLSVTLDDRLVADPTGLPV 366
++ +AA+ + + W+R SV++D +V DP L V
Sbjct: 456 MELDAAVKIAGEAAVALWSRRFSVSIDSHIVVDPVFLDV 494
>08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931
Length = 461
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 234 LFGLAHQNGGGNWGRVH-LIGFSLGAHVVG-NAGRQAGGRPNRVTGLDPAGPRWG 392
+FG+AHQ+ GG +H G L A + G +AG N + G+ P+ G
Sbjct: 307 VFGVAHQHSGGIGASLHGQDGRLLCASIPSYGKGEEAGNEDNYIVGMSTCYPKPG 361
>02_01_0286 + 1921049-1921726
Length = 225
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 243 LAHQNGGGNWGRVHLIGFS--LGAHVVGNAGRQAGGRPNRVTGLDPAGP 383
L +NGG + H IG L GN G G RP +VTG+ A P
Sbjct: 178 LKRENGGRGF---HFIGEGRDLATGGAGNGGGNGGRRPRKVTGIVAAVP 223
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 258 GGGNWGRVHLIGFSLGAHVVGNAGRQ-AGGRPNRVTGLDPAGPRWGG 395
GGG G GF G V GN GR GG+ N + G D A GG
Sbjct: 278 GGGGGGMGGGGGFGGGGGVGGNTGRDFDGGKGNGLNGGDGASGGIGG 324
>11_08_0044 + 27962964-27963329
Length = 121
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 240 GLAHQNGGGNWGRVHLIGFSLGAHVVG-NAGRQAGGR 347
G+ H NGGG GR LI S GA + G G+ GGR
Sbjct: 45 GVGHGNGGGRRGRRGLISLS-GAPLSGVLEGKWRGGR 80
>11_08_0041 + 27915463-27915828
Length = 121
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 240 GLAHQNGGGNWGRVHLIGFSLGAHVVG-NAGRQAGGR 347
G+ H NGGG GR LI S GA + G G+ GGR
Sbjct: 45 GVGHGNGGGRRGRRGLISLS-GAPLSGVLEGKWRGGR 80
>10_01_0044 - 583349-584044
Length = 231
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 237 KVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADH--GVH 97
+V ++ TG+S DG + +G + N G Q+ DH GVH
Sbjct: 79 RVVADVPGTGSSKDGEMKQALGGSAQPSNKGATNGSAQENQGDHSQGVH 127
>07_03_0558 + 19461369-19462448
Length = 359
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 258 GGGNWGRVHLIGFSLGAHVVGNAGRQAGG 344
GGG G H GF GA V G AG GG
Sbjct: 319 GGGGLGGGHGGGFGAGAGVGGGAGGGVGG 347
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 258 GGGNWGRVHLIGFSLGAHVVGNAGRQAGG 344
GGG G H GF GA V G AG GG
Sbjct: 283 GGGGLGGGHGSGFGGGAGVGGGAGGGVGG 311
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 258 GGGNWGRVHLIGFSLGAHVVGNAGRQAGG 344
GGG G H GF GA V G AG GG
Sbjct: 179 GGGGLGGGHGGGFGGGAGVGGGAGGGVGG 207
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -3
Query: 421 ALRFRAWLLPPHLGPAGSKPVTLLGLPPACR--PALPTTCAPKLKPIKWT 278
AL A L P GS T PP C+ P PT P P WT
Sbjct: 15 ALALSAQLAPAAATWCGSNCPTTKPPPPPCQPPPPTPTPATPTTPPTPWT 64
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 66 PRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWS 206
P L +Q E +P R+ R + ++ C L W+ S+Q +WS
Sbjct: 812 PTLGEQPAQPTESAEPNRIIPRPKERQDCNQLTWTTAPSLQFLNRWS 858
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -3
Query: 484 AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTTCA 305
A S R P+ +A P LR L PP P T + +PPA P +PT A
Sbjct: 155 ASSSSAMPRAPTASLALRAPPHLRAPCGLAPPV--PTPPALATHVPMPPAPAPPVPTPPA 212
Query: 304 P 302
P
Sbjct: 213 P 213
>06_01_1023 -
7996240-7996369,7997166-7997260,7997430-7997515,
7998034-7998184
Length = 153
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 333 QAGGRPNRVTGLDPAGPRWGGNNQALNRNAGAYV 434
+AG R R G DP P WGG + G V
Sbjct: 8 EAGRRRRRGGGSDPPSPMWGGGRRRAVSRRGKLV 41
>10_06_0012 - 9586478-9588880
Length = 800
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 73 WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 201
W++NG + V P L SD N++++D + N +++T VN
Sbjct: 78 WSANGENPVVDPASPELAISSDGNMVILD-QVTKNIIWSTHVN 119
>07_01_0862 - 7172083-7172931
Length = 282
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 400 LLPPHLGPAGSKPVTLLGLPPACRPAL-PTTCAPKLKPI 287
L PP L P + L LPP +P L P PK KP+
Sbjct: 145 LFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPL 183
>07_01_0452 - 3418572-3418763,3419140-3419223
Length = 91
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 236 KLPRNCPTLGTPL---TAVLYRPLARPRQSTTITLQSET 129
KL NCPT G P T L +PL R + T L S T
Sbjct: 42 KLKINCPTTGLPSVDHTNHLIKPLGCARDANTTALYSTT 80
>09_04_0754 -
19946423-19947061,19947315-19947429,19947509-19947587,
19947863-19948007
Length = 325
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Frame = -2
Query: 329 SSVTDNVRAQAEANQVDSTPIAASVLMSQTKKLPRNCPTLGTPLTAVL------YRPLAR 168
+S + + ++ +TP A S S K + P L TA Y PL
Sbjct: 121 TSTSTRTESPTSSSSKSATPTARSSSSSSKKNFTKGDPALSEVTTAYKMDKRSSYTPLKN 180
Query: 167 PRQSTTITLQSETASKAGR 111
+Q T +S ASKA +
Sbjct: 181 IQQLAAPTTKSTAASKAAK 199
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = -2
Query: 368 QTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVLMSQTKKLPRNCPTLGTPLTAV 189
+ G PVG+ TS + V RA +AN + S + LP + T ++
Sbjct: 381 EIGTPVGTPTSANLEVNSKARADGDANGLKHA--VTSCQKDTSDALPLDSTTADAFSSST 438
Query: 188 LYRPLARPRQS-TTITLQSETASKAGRIMVFTA 93
L P + + + Q +TA + MV T+
Sbjct: 439 LNTTSPSPLSAIASSSPQKQTAPRVEDDMVITS 471
>04_04_0632 +
26738969-26739350,26739535-26739543,26739674-26740545,
26743048-26743098,26743966-26744127,26744278-26744519,
26744772-26744859,26744964-26745158
Length = 666
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 515 FLHRWVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQ-GLVVTTPPGP 378
FLH + T+ + VK T VD +S+ V+ GL +TPPGP
Sbjct: 288 FLHYDLLPTLLHVVKGTGMWEC-VDLYPVSTSPAVEDGLETSTPPGP 333
>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
Length = 554
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 134 PTATLLLWT--GVVLPTVYTTLPSMEFPV 214
P +T+L+WT G ++ VYTT+P P+
Sbjct: 19 PASTMLVWTQVGEIVFPVYTTMPISTCPL 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,468,889
Number of Sequences: 37544
Number of extensions: 520787
Number of successful extensions: 2094
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2092
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -