Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0305
(581 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.54
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.72
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.72
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.9
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 3.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.8
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 6.7
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 6.7
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 8.9
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.54
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 576 YENVSFNHRMFNINYENKTK--YTDKINLLINPV 481
Y N ++N+ +N NY N K Y + IN+ PV
Sbjct: 333 YNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPV 366
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.6 bits (51), Expect = 0.72
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 564 SFNHRMFNINYENKTKYTDKINLLINPV 481
++N++ +N NY +K Y + IN+ PV
Sbjct: 308 NYNYKNYNNNYNSKKLYYNIINIEQIPV 335
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.72
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 564 SFNHRMFNINYENKTKYTDKINLLINPV 481
++N++ +N NY +K Y + IN+ PV
Sbjct: 319 NYNYKNYNNNYNSKKLYYNIINIEQIPV 346
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 164 WPSEELLQQHYSDLASRPFFPGLVKYMSSGLWSLWYGR 277
W S+ + D+ SR FFP + + + WS + R
Sbjct: 404 WLSKFPTRSKRIDVISRIFFPIVFAFFNLAYWSTYLFR 441
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 164 WPSEELLQQHYSDLASRPFFPGLVKYMSSGLWSLWYGR 277
W S+ + D+ SR FFP + + + WS + R
Sbjct: 404 WLSKFPTRSKRIDVISRIFFPIVFAFFNLAYWSTYLFR 441
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 579 LYENVSFNHRMFNINYENKTKYTDKINLLIN 487
L N ++N+ + NY N K N +IN
Sbjct: 318 LSNNYNYNNNNYKYNYNNYNKKLYYKNYIIN 348
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 88 YTIRLNHNKSTLTLFRHHEILLTCSI 11
Y + + +K T T+ +H I L CS+
Sbjct: 61 YPLPYSGSKCTWTITSYHRINLKCSL 86
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 3.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 410 NLLKRK*ASGLRTKKLWAGHLQMKTGFMSKFILSVY 517
NLL+ +S K A LQ + G + F+LS +
Sbjct: 21 NLLRTSFSSAKLEKLYRASSLQQRRGGLEYFLLSAF 56
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = -1
Query: 446 SVNQRPISFLADSTLSEPW 390
S+N+ ++++AD L++ W
Sbjct: 43 SINEESMTYVADIFLAQSW 61
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -2
Query: 55 LTLFRHHEILLTCSIN 8
L + +HH + CS+N
Sbjct: 123 LQMTKHHNFIKVCSVN 138
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 277 GLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRN 384
G +V +G+Q G +QP T++ + + +N
Sbjct: 920 GSGIVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQN 955
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,709
Number of Sequences: 438
Number of extensions: 3449
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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