Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0305
(581 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1) ... 117 5e-27
At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4) ... 109 2e-24
At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3, mitoch... 109 2e-24
At5g63310.1 68418.m07945 nucleotide diphosphate kinase II, chlor... 103 9e-23
At1g17410.1 68414.m02126 nucleoside diphosphate kinase family pr... 50 1e-06
At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)... 30 1.3
At2g23000.1 68415.m02743 serine carboxypeptidase S10 family prot... 29 2.3
At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family pr... 29 3.0
At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family pr... 29 3.0
At4g22980.1 68417.m03316 expressed protein ; expression supporte... 28 4.0
At1g63880.1 68414.m07234 disease resistance protein (TIR-NBS-LRR... 28 5.2
At1g60790.1 68414.m06843 expressed protein 27 6.9
>At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1)
identical to identical to Nucleoside diphosphate kinase
I (NDK I) (NDP kinase I) (NDPK I) (SP:P39207)
[Arabidopsis thaliana]; contains Pfam PF00334 :
Nucleoside diphosphate kinase domain;
Length = 169
Score = 117 bits (282), Expect = 5e-27
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
VV M+WEG NVV TGR+++GATNPA S+PGTIRGD I +GRN+IHGSDSVESA+KEI L
Sbjct: 90 VVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIAL 149
Query: 436 WFTDKEVVGWTPANENWVYE 495
WF D V W + WVYE
Sbjct: 150 WFPDGP-VNWQSSVHPWVYE 168
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Frame = +2
Query: 53 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 232
E+TFIM+KPDGVQRGL+G +I RFEKKGF L GLK + ++HY DL+S+ FF GL
Sbjct: 22 EQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGL 81
Query: 233 VKYMSSG--LWSLWYGRALML 289
V Y+ SG + +W G+ ++L
Sbjct: 82 VDYIVSGPVVAMIWEGKNVVL 102
>At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4)
contains Pfam PF00334 : Nucleoside diphosphate kinase
domain; identical to nucleoside diphosphate kinase 4
(GI:11990430) [Arabidopsis thaliana]
Length = 237
Score = 109 bits (261), Expect = 2e-24
Identities = 47/79 (59%), Positives = 60/79 (75%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
VV MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIHGSD E+AK EI L
Sbjct: 156 VVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISL 215
Query: 436 WFTDKEVVGWTPANENWVY 492
WF +E+V +T E W+Y
Sbjct: 216 WFKPEELVSYTSNAEKWIY 234
Score = 98.7 bits (235), Expect = 2e-21
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +2
Query: 38 MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 217
+A + ERTFI +KPDGVQRGL+ II RFE+KG+KLVG+K + PS+ Q+HY DL RP
Sbjct: 83 LAAEMERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERP 142
Query: 218 FFPGLVKYMSSG--LWSLWYGRALM 286
FF GL ++SSG + +W G ++
Sbjct: 143 FFNGLCNFLSSGPVVAMVWEGEGVI 167
>At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3,
mitochondrial (NDK3) identical to Nucleoside diphosphate
kinase III, mitochondrial precursor (NDK III) (NDP
kinase III) (NDPK III) (SP:O49203) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain;
Length = 238
Score = 109 bits (261), Expect = 2e-24
Identities = 46/79 (58%), Positives = 61/79 (77%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
V+ MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIHGSD E+AK EI L
Sbjct: 157 VIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPETAKDEISL 216
Query: 436 WFTDKEVVGWTPANENWVY 492
WF +E+V +T +E W+Y
Sbjct: 217 WFKPQELVSYTSNSEKWLY 235
Score = 102 bits (244), Expect = 2e-22
Identities = 46/82 (56%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
Frame = +2
Query: 35 MMAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASR 214
++A + ERTFI +KPDGVQRGL+ II RFE+KGFKLVG+K + PS++ Q+HY DL R
Sbjct: 83 VLAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKER 142
Query: 215 PFFPGLVKYMSSG--LWSLWYG 274
PFF GL ++SSG + +W G
Sbjct: 143 PFFNGLCDFLSSGPVIAMVWEG 164
>At5g63310.1 68418.m07945 nucleotide diphosphate kinase II,
chloroplast (NDPK2) identical to SP|O64903 Nucleoside
diphosphate kinase II, chloroplast precursor (NDK II)
(NDP kinase II) (NDPK II) (NDPK Ia) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain; contains Pfam profile
PF00334: Nucleoside diphosphate kinase
Length = 231
Score = 103 bits (247), Expect = 9e-23
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
VV M WEG+ VV + R+++G T+P ++PGTIRGDL +Q GRNI+HGSDS E+ K+EIGL
Sbjct: 152 VVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGL 211
Query: 436 WFTDKEVVGWTPANENWVYE 495
WF + E+ W A W+ E
Sbjct: 212 WFKEGELCKWDSALATWLRE 231
Score = 99.5 bits (237), Expect = 1e-21
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = +2
Query: 44 EQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFF 223
E E T+IMVKPDG+QRGLVG II RFEKKGFKL+GLK +EL ++HY DL+++ FF
Sbjct: 81 EDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFF 140
Query: 224 PGLVKYMSSG 253
P L++Y++SG
Sbjct: 141 PNLIEYITSG 150
>At1g17410.1 68414.m02126 nucleoside diphosphate kinase family
protein contains Pfam PF00334 : Nucleoside diphosphate
kinase domain; similar to Nucleoside diphosphate kinase
homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-H5)
(Testis-specific nm23 homolog) (Inhibitor of p53-induced
apoptosis-beta) (IPIA-beta) (SP:P56597) {Homo sapiens}
Length = 181
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/71 (38%), Positives = 34/71 (47%)
Frame = +2
Query: 41 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 220
A ERT M+KPDGV I + GF +V +E Y + +SR F
Sbjct: 29 ASSEERTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSF 88
Query: 221 FPGLVKYMSSG 253
FP LV YM+SG
Sbjct: 89 FPHLVTYMTSG 99
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +1
Query: 172 RRTSPATLQRFGIPAFLPWSSKVHEFRTVVPMVWEGLNVVKTGRQMLGATNPAD---SQP 342
+ T+ A + +F P V+ MV E N V R ++G T+ S P
Sbjct: 73 KETASAFYEEHSSRSFFPHLVTYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHP 132
Query: 343 GTIRGDLCIQVGRNIIHGSDSVESAKKEIGLWFTD 447
+IR +N +HGSDS SA++EI +F D
Sbjct: 133 HSIRALCGKNSQKNCVHGSDSTSSAEREIKFFFKD 167
>At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 386
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 408 NAVRTMDDVTPNLNAEITADSAGLRVS 328
NA+R DDV+P +N A +GLRVS
Sbjct: 79 NALRQADDVSPEINTTKLAFVSGLRVS 105
>At2g23000.1 68415.m02743 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 437
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = -3
Query: 576 YENVSFNHRMFNINYENKTKYTDKINLLINPVFICRCPAHNFFVRKPEAYF-LFSRFNAV 400
YENV + E K TDKIN + I C + P+ Y+ L+
Sbjct: 247 YENVDPRNTKCVRLVEEYHKCTDKINT--QHILIPDCDKKGHGITSPDCYYYLYFLIECW 304
Query: 399 RTMDDVTPNLNAEITADSAGLRVSWVSCAKHLTASLHNIKALPYHRDHS 253
+ V L+ + G + W C + + I ++PYH D+S
Sbjct: 305 ANNERVREALHV-----TKGTKGQWQRCNWTIPYDNNIISSVPYHMDNS 348
>At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 442
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 482 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 375
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 553
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 482 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 375
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At4g22980.1 68417.m03316 expressed protein ; expression supported
by MPSS
Length = 559
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 101 VGTIIERFEKKGFKLVGLKFVWPSEELLQQ 190
V +I EKKG K +F WPS E+L +
Sbjct: 205 VEEMIRISEKKGIKPQSAEFSWPSTEILSE 234
>At1g63880.1 68414.m07234 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1017
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 166 PYEFQTD*FEAFLFETFNN-GAHKTTLYTIRLNHNKSTLTLFRHHEILLTCSI 11
P F + ++ +F +F+ KT L IRL N++ +T+F +I+ + +I
Sbjct: 4 PSSFSSQNYKFNVFASFHGPDVRKTLLSHIRLQFNRNGITMFDDQKIVRSATI 56
>At1g60790.1 68414.m06843 expressed protein
Length = 541
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 133 FLFETFNNGAHKTTLYTIRLNHNKSTLTLFRHHEILL 23
F+ E+ G + TTL T+RL+ T +++R +IL+
Sbjct: 324 FVRESSFKGVNGTTLETLRLDMMDKTTSMYRDADILI 360
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,625,173
Number of Sequences: 28952
Number of extensions: 263613
Number of successful extensions: 716
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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