Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0304
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   9.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 669 LLHCILRVQYNNAFRVLVV 613
           L++ ILR  Y N +R L+V
Sbjct: 485 LINSILRKLYKNKYRKLIV 503


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 430 GRWYHNDPCILSPACLRSCSGYC 498
           G ++  +PCI   A  R  +G C
Sbjct: 82  GFFHEREPCIAGSAPCRKNTGRC 104


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 253 KLAAVHYLLAFTYN 294
           +L AVH +LAF Y+
Sbjct: 132 ELVAVHLVLAFLYS 145


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 668 YCIAFSVFNIITPSGCWWCCPAFVAHQGC 582
           YC   SV+ +       +   AF+  Q C
Sbjct: 182 YCFNSSVYKVFPVEHLLFIANAFITSQSC 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,418
Number of Sequences: 336
Number of extensions: 3296
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)